Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02349 and BL03649
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence dna-align/BSNT_02349___ykyB.1.5803.seq
# -bsequence dna-align/BL03649___ykyB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02349___ykyB-BL03649___ykyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02349___ykyB-BL03649___ykyB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02349___ykyB
# 2: BL03649___ykyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity: 367/468 (78.4%)
# Similarity: 367/468 (78.4%)
# Gaps: 9/468 ( 1.9%)
# Score: 1405.5
#
#
#=======================================
BSNT_02349___ 1 ATGGACGACCATGCAT-ATACGAAAGATCTGCAGCCAACCGTAGAAAATC 49
|||||||||||| .|| ||||||||||..|..|.||.||.||.|||||.|
BL03649___yky 1 ATGGACGACCAT-AATCATACGAAAGAATTAAAACCGACAGTTGAAAACC 49
BSNT_02349___ 50 TTTCAAAAGCAGTTTACACTGTGAACCGCCATGCAAAAACCGCCCCCAAC 99
||||||||||..||||.||.||.|||||||||||.||||||||..|.||.
BL03649___yky 50 TTTCAAAAGCGATTTATACAGTTAACCGCCATGCGAAAACCGCGACTAAT 99
BSNT_02349___ 100 CCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAA 149
||.||||||||.|||||.||||||||....||||||||||||||..|.||
BL03649___yky 100 CCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAA 149
BSNT_02349___ 150 AGAAGGTAAAGGAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGT 199
.|||||.|||||.||.||..||||.||.||||||||.|||||||||||.|
BL03649___yky 150 TGAAGGAAAAGGTAAAAAGGTAGGCCTGCATTTTTCGAAAAATCCAAGAT 199
BSNT_02349___ 200 TCAGCCAACAGCAATCGGACGTGCT--TATCTCAATCGGAGACTACTATT 247
|||||||.|||||.||.||.||||| |||||| ||||||||||||.||
BL03649___yky 200 TCAGCCAGCAGCAGTCAGATGTGCTGATATCTC--TCGGAGACTACTTTT 247
BSNT_02349___ 248 TTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGT 297
||||||||||||||||.|||||||||||||.|.|.|||||.||.||||||
BL03649___yky 248 TTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGT 297
BSNT_02349___ 298 ACACTTAATCAATCGTACCGAAATCCTAAAGCTCAAATGTCTTTAACAAA 347
|||.|.|||||.|||||.||.||.|||||||||||.|||||.||.|..|.
BL03649___yky 298 ACATTAAATCATTCGTATCGGAACCCTAAAGCTCATATGTCCTTGAATAT 347
BSNT_02349___ 348 AGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAG 397
|||||||||.||..|.|||.|.||....||.||.||||||||.|||||.|
BL03649___yky 348 AGCGAAACAGCTTCTTCAAAACTACACGGGAATCAAAGAAAAACCGCTCG 397
BSNT_02349___ 398 TGCCAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTT 447
|..||||.||..|||..|||||.| || |||||.|||||.||.||.|||
BL03649___yky 398 TCACAAACCGGAAGCGTCCAGCCT--CA-AAACCCGTCTTCAAGAAGCTT 444
BSNT_02349___ 448 GGCGAGAGTTACTTTTAA 465
|||||.||.||.||||||
BL03649___yky 445 GGCGAAAGCTATTTTTAA 462
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