Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02344 and BL03647
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence pep-align/BSNT_02344___patA.1.5803.seq
# -bsequence pep-align/BL03647___patA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02344___patA-BL03647___patA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02344___patA-BL03647___patA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02344___patA
# 2: BL03647___patA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 335/393 (85.2%)
# Similarity: 366/393 (93.1%)
# Gaps: 4/393 ( 1.0%)
# Score: 1752.0
#
#
#=======================================
BSNT_02344___ 1 MEHLLNPKAREIEISGIRKFSNLVAQHEDVISLTIGQPDFFTPHHVKAAA 50
|||||||..:||||||||||||||:|:|:||||||||||||||||||.||
BL03647___pat 1 MEHLLNPNVKEIEISGIRKFSNLVSQYENVISLTIGQPDFFTPHHVKQAA 50
BSNT_02344___ 51 KKAIDENVTSYTPNAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQ 100
|||||||.||||.||||.|||||||||||||||.||:||||||:||||||
BL03647___pat 51 KKAIDENQTSYTHNAGYPELRQAVQLYMKKKADLNYEAESEIIVTTGASQ 100
BSNT_02344___ 101 AIDAAFRTILSPGDEVIMPGPIYPGYEPIINLCGAKPVIVDTTSHGFKLT 150
|||:|||||||||||||:|||:||||||||.:|||.|:|:||||||||||
BL03647___pat 101 AIDSAFRTILSPGDEVILPGPVYPGYEPIIKMCGASPLIIDTTSHGFKLT 150
BSNT_02344___ 151 ARLIEDALTPNTKCVVLPYPSNPTGVTLSEEELKSIAALLKGRNVFVLSD 200
|:|||:||||.||||||||||||||:||||||||.||:||||||||||||
BL03647___pat 151 AKLIEEALTPKTKCVVLPYPSNPTGMTLSEEELKDIASLLKGRNVFVLSD 200
BSNT_02344___ 201 EIYSELTYDRPHYSIANHLRDQTIVINGLSKSHSMTGWRIGFLFAPKDIA 250
|||||||:||||:|||..||||||||.||||||||||||||||||||:||
BL03647___pat 201 EIYSELTFDRPHHSIATVLRDQTIVIGGLSKSHSMTGWRIGFLFAPKEIA 250
BSNT_02344___ 251 KHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDR 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03647___pat 251 KHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDR 300
BSNT_02344___ 301 LVSMGLDVVKPSGAFYIFPSIKSFGMTSFDFSMALLEDAGVALVPGSSFS 350
||:|||||:|||||||||||||||||:||||.|:|||:.|:|:|||||||
BL03647___pat 301 LVTMGLDVIKPSGAFYIFPSIKSFGMSSFDFCMSLLEEEGLAIVPGSSFS 350
BSNT_02344___ 351 TYGEGYVRLSFACSMDTLREGLDRLELFVLKKREAMQTINNGV 393
.|||||||:|:|.|.|||||||||||.||..||:::||.
BL03647___pat 351 EYGEGYVRISYAYSPDTLREGLDRLESFVFNKRQSIQTT---- 389
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