Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02291 and BL03636

See DNA alignment / Visit BSNT_02291 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:48
# Commandline: needle
#    -asequence pep-align/BSNT_02291___ykvA.1.5803.seq
#    -bsequence pep-align/BL03636___ykvA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02291___ykvA-BL03636___ykvA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02291___ykvA-BL03636___ykvA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02291___ykvA
# 2: BL03636___ykvA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      40/117 (34.2%)
# Similarity:    58/117 (49.6%)
# Gaps:          19/117 (16.2%)
# Score: 181.5
# 
#
#=======================================

BSNT_02291___      1 ---MKKKKAIMLGAAGGKAILKRKNRKKCIQHITIFFQMLRDWRNGDYPR     47
                        |.||....|......        |:....:.:||:..|.||.||||.
BL03636___ykv      1 MRQMMKKPVSKLRTVFAV--------KEAYSGLLLFFRAFRAWRKGDYPL     42

BSNT_02291___     48 SQVKTLLLLTAAILYIVMPLDIIPDVILGLGFIDDAAVLGLIWTLIKKEL     97
                     ...||:||...|.:|::.|:|:||||:.|:|::||||||..::..|.|||
BL03636___ykv     43 FPKKTILLAALAFIYVLSPIDLIPDVLAGVGWLDDAAVLAFLFRQITKEL     92

BSNT_02291___     98 SQYE---KWRLQ-----    106
                     ..:|   ..|:.     
BL03636___ykv     93 DGFETHLTGRVNYNGKQ    109


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