Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02955 and BL03635

See DNA alignment / Visit BSNT_02955 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_02955___fosB.1.5803.seq
#    -bsequence pep-align/BL03635___fosB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02955___fosB-BL03635___fosB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02955___fosB-BL03635___fosB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02955___fosB
# 2: BL03635___fosB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:      87/154 (56.5%)
# Similarity:   102/154 (66.2%)
# Gaps:          15/154 ( 9.7%)
# Score: 445.0
# 
#
#=======================================

BSNT_02955___      1 ---MEIKGINHLLFSVSHLDTSIDFYQKVFDAKLLVKGRTTAYFDMNGIW     47
                        .:|.||||||||||.|..||.||:||||||.|||...|||||:||||
BL03635___fos      1 MENNKILGINHLLFSVSDLSVSISFYEKVFDAKWLVKAEKTAYFDLNGIW     50

BSNT_02955___     48 LALNEEPDIPRNDIKLSYTHIAFTIEDHEFEEVSAKLKRLHVNILPGRER     97
                     ||.|||.||.|.:|..|||||||:|:..:......||..|.||:|.||:|
BL03635___fos     51 LAFNEEKDIKRQEIHDSYTHIAFSIQQEDLPFWEKKLHDLGVNVLKGRKR    100

BSNT_02955___     98 DERDRKSIYFTDPDGHKFEFHTGTLQDRLRYYKQEKTHMHFL--------    139
                     .|.||.||||:||||||||.|||::.|||:||:.||.|:.|.        
BL03635___fos    101 HEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEGHIKALY    150

BSNT_02955___    139 ----    139
                         
BL03635___fos    151 DRNK    154


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.