Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02955 and BL03635
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence dna-align/BSNT_02955___fosB.1.5803.seq
# -bsequence dna-align/BL03635___fosB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02955___fosB-BL03635___fosB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02955___fosB-BL03635___fosB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02955___fosB
# 2: BL03635___fosB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 494
# Identity: 299/494 (60.5%)
# Similarity: 299/494 (60.5%)
# Gaps: 103/494 (20.9%)
# Score: 825.5
#
#
#=======================================
BSNT_02955___ 1 GTGGA----GATAAAA-----GGAATCAATCA---CTTGCTATTTTCAGT 38
.|||| .|||||| ||.|||||||| |||| |||||.||
BL03635___fos 1 ATGGAAAACAATAAAATCCTCGGCATCAATCATCTCTTG---TTTTCGGT 47
BSNT_02955___ 39 TTCGCATTTGGATAC--ATCGATTGATTTTTATCAAAAAGTGTTTGATGC 86
.||..|..|| |.| .||.|||...||.|||.||||.|||||||||||
BL03635___fos 48 CTCTGACCTG--TCCGTCTCTATTTCATTCTATGAAAAGGTGTTTGATGC 95
BSNT_02955___ 87 AAAGCTTTTG----GTAAAGG--GAAGAACAACTGCATATTTTGACATGA 130
.||| || |||||.| | |||| |||.||.|||||||||.|||
BL03635___fos 96 CAAG----TGGCTCGTAAAAGCCG-AGAA-AACCGCTTATTTTGACCTGA 139
BSNT_02955___ 131 ACGGCATCTGGCTAGCGCTTAATGAAGAACCAGACATCCCGAGAAATGAC 180
|||||||||||||.||..|.||.|||||...|||||| .|||.|||
BL03635___fos 140 ACGGCATCTGGCTCGCATTCAACGAAGAGAAAGACAT-----TAAAAGAC 184
BSNT_02955___ 181 ATTAAGCTT-------TCTTATACCCATATTGCTTTTACAATTGAAGATC 223
|..|| .| |||||.||||||||.||.|||.|.||..|| |
BL03635___fos 185 AGGAA--ATCCACGACTCTTACACCCATATCGCGTTTTCGATCCAA---C 229
BSNT_02955___ 224 ATGA--ATTTGAGG---AGGTATCAGCTAAATTAAAAAGACTT---CATG 265
|.|| |||||..| .||.|..|| ||||| |.|.||.|| | |
BL03635___fos 230 AGGAAGATTTGCCGTTCTGGGAAAAG--AAATT-ACACGATTTAGGC--G 274
BSNT_02955___ 266 TCAATATTCTGCCTGGCAGAGAACGAGATGAACGCGATCGAAAATCAATT 315
|.|||.|.|||...||||||.||||..|||||.|.||..||.|.||||||
BL03635___fos 275 TTAATGTGCTGAAGGGCAGAAAACGGCATGAAGGAGACAGAGATTCAATT 324
BSNT_02955___ 316 TATTTTACCGACCCTGACGGCCACAAATTTGAATTTCATACCGGAACCCT 365
|||||..|.||.||.||||||||.||.||.||..||||.||.|| |.||
BL03635___fos 325 TATTTCTCAGATCCAGACGGCCATAAGTTCGAGCTTCACACAGG--CTCT 372
BSNT_02955___ 366 TCA--AGACAGGCTTCGATATTA-CAAACAAGAAAAAACGCAT------- 405
..| .|||.|.||||.|||.|| |||| |.||||||.|||||
BL03635___fos 373 GTATTTGACCGTCTTCAATACTATCAAA-ATGAAAAACCGCATCTTTCAT 421
BSNT_02955___ 406 ---ATGCA-------------CTTTTTATGA------------- 420
|||.| ||.|||||||
BL03635___fos 422 TTCATGAAGGCCACATCAAGGCTCTTTATGACAGAAACAAATAA 465
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