Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02268 and BL03630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_02268___ykrK.1.5803.seq
# -bsequence pep-align/BL03630___ykrK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02268___ykrK-BL03630___ykrK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02268___ykrK-BL03630___ykrK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02268___ykrK
# 2: BL03630___ykrK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 142/239 (59.4%)
# Similarity: 186/239 (77.8%)
# Gaps: 6/239 ( 2.5%)
# Score: 735.0
#
#
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BSNT_02268___ 1 MNIFKLSRTDMVRLLYSLKGQGEHSPLDILVQSANMSAEKAANHLEIPEF 50
|..|||:|.:|.:|:|:||||.:.|||.||::||:::.::..::|:||||
BL03630___ykr 1 MKPFKLTRLEMAKLMYALKGQLDVSPLAILLRSADLAPDEPEDNLDIPEF 50
BSNT_02268___ 51 LTRYERKKQKKEYGLSTNEIVELGNLCELTSLKSTAIQNWVKRDIKDLIG 100
:.||||||||.|:|||||||||||||||||||||||||||:|||||||:|
BL03630___ykr 51 IARYERKKQKTEHGLSTNEIVELGNLCELTSLKSTAIQNWIKRDIKDLMG 100
BSNT_02268___ 101 HPELGKKYSIEQAVILLIVRDLKSIYDFEHIRAILKVAFNTISDRSDDVI 150
||||||||||:|||||||||||||:||||.||.||...||||:||||||:
BL03630___ykr 101 HPELGKKYSIDQAVILLIVRDLKSVYDFETIRPILTTIFNTITDRSDDVV 150
BSNT_02268___ 151 SPIAYYESCAYVLDAIHHQDTPSMKESNLQEIAEQETERLRHRFEELNDS 200
||:.:||..|.|||.::.....::.:|.|::|..::|.:||..:::|.|.
BL03630___ykr 151 SPLRFYEGYARVLDHVYQIKDYTLNKSALEKIVIEQTGQLRDFYKDLADP 200
BSNT_02268___ 201 QWLKIRQIIAITVLSILTFHIQATAHKMTADIL------ 233
:|.|.|.|.|:||||::..|||||||.|...:.
BL03630___ykr 201 EWNKARDITAVTVLSVIASHIQATAHSMIDSVFLKYEMK 239
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