Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02268 and BL03630
See
Amino acid alignment /
Visit
BSNT_02268 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence dna-align/BSNT_02268___ykrK.1.5803.seq
# -bsequence dna-align/BL03630___ykrK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02268___ykrK-BL03630___ykrK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02268___ykrK-BL03630___ykrK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02268___ykrK
# 2: BL03630___ykrK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 780
# Identity: 484/780 (62.1%)
# Similarity: 484/780 (62.1%)
# Gaps: 138/780 (17.7%)
# Score: 1364.0
#
#
#=======================================
BSNT_02268___ 1 ATGAACATTTTTAAACTCTCTCGAACC--GATATGGTGCGGCTGCTCTAT 48
|||||...|||||||||..|||| || ||.||||.....|||.|.||.
BL03630___ykr 1 ATGAAACCTTTTAAACTGACTCG--CCTGGAAATGGCCAAACTGATGTAC 48
BSNT_02268___ 49 TCCCTAAAAGGACA--AGGAGAACATAGCCCGCTCGACATTC-------- 88
.|..|||||||.|| .|||...| ||.|||||.|..||||
BL03630___ykr 49 GCTTTAAAAGGGCAGCTGGATGTC--AGTCCGCTAGCGATTCTTTTGAGA 96
BSNT_02268___ 89 TCGTCCAATCAG-----CGAACATGTCAGCAGAAAAAGCAGCCAATCATC 133
|||.||.||..| ||| |.|||.| |.||.|| ||.
BL03630___ykr 97 TCGGCCGATTTGGCGCCCGA-----TGAGCCG-----GAAGACA---ATT 133
BSNT_02268___ 134 TAGAAATTCCTGAATTTCTTACAAGATATGAACGAAAAAAACAGAAAAAA 183
|.||.||.||.|||||..||.|..|.||.|||||.||||||||.||||..
BL03630___ykr 134 TGGACATCCCCGAATTCATTGCCCGGTACGAACGGAAAAAACAAAAAACG 183
BSNT_02268___ 184 GAATACGGACTGTCTACAAATGAAATCGTAGAGCTTGGCAACTTATGCGA 233
|||.|||||||.||.|||||||||||.||.||.|||||.||.||.|||||
BL03630___ykr 184 GAACACGGACTTTCCACAAATGAAATTGTTGAACTTGGAAATTTGTGCGA 233
BSNT_02268___ 234 GCTGACTTCGTTAAAGTCAACCGCGATTCAAAACTGGGTAAAGCGTGATA 283
.|||||.||.|||||.||.||.||.||.|||||||||.|.||.||.||||
BL03630___ykr 234 ACTGACATCCTTAAAATCGACAGCCATCCAAAACTGGATCAAACGCGATA 283
BSNT_02268___ 284 TCAAAGATCTGATCGGACACCCTGAGCTAGGCAAAAAATACTCAATTGAA 333
|.||||||.||||.||.||.||.||.||.|||||||||||.||.||.||.
BL03630___ykr 284 TAAAAGATTTGATGGGGCATCCGGAACTCGGCAAAAAATATTCCATCGAC 333
BSNT_02268___ 334 CAGGCAGTTATTCTTTTAATTGTACGTGATTTAAAATCCATTTATGACTT 383
||.||.||.||.|||.|.||||||||.||.||||||||..||||||||||
BL03630___ykr 334 CAAGCCGTCATCCTTCTCATTGTACGAGACTTAAAATCGGTTTATGACTT 383
BSNT_02268___ 384 TGAACAC-ATACGGGCTATTTTAAAAGTGGCCTTTAACACAATCTCAGAC 432
.||| || ||.||..|.||.||||.|..|...|||||.||.||..|||||
BL03630___ykr 384 CGAA-ACGATCCGTCCGATCTTAACAACGATTTTTAATACGATTACAGAC 432
BSNT_02268___ 433 AGATCTGATGATGTCATCAGCCCGAT-TGCTTATTATGAAAG--CTGCGC 479
.|.||.||||||||..|.||.|||.| .|||| |||||||.| .|||||
BL03630___ykr 433 CGCTCCGATGATGTAGTGAGTCCGCTGCGCTT-TTATGAAGGGTATGCGC 481
BSNT_02268___ 480 ATATGTGCTTGATGCCAT-----CC--ATCACCAAG---ATACTCCTTCC 519
..||.|||||| ||| || |||| ||| ||||.| ||.
BL03630___ykr 482 --GGGTCCTTGAT--CATGTGTACCAGATCA--AAGACTATACGC--TCA 523
BSNT_02268___ 520 ATGAAAGAATCAAATCTGC-----AGGAGATCGCC---GAACAGGA---G 558
|| |||||.|| |..|.||||.| ||.|| || |
BL03630___ykr 524 AT---------AAATCGGCGCTTGAAAAAATCGTCATTGAGCA-GACTGG 563
BSNT_02268___ 559 ACAGAGCGTCTCCGTCACCG----TTTTGAAGAACTGAATGACAGCC--- 601
|||| ||||| || ||.|.||||.||| |||
BL03630___ykr 564 ACAG-----CTCCG----CGATTTTTATAAAGATCTG-------GCCGAT 597
BSNT_02268___ 602 ----AATGGCTTAAAATCAGACAGATTATCGCTATTACAGTCCTCTCCAT 647
|||||...|||...|||.|.||.|.|||..|.||.||.||.|||
BL03630___ykr 598 CCCGAATGGAACAAAGCGAGAGACATCACCGCAGTCACTGTGCTGTCC-- 645
BSNT_02268___ 648 TTTGACA----TTC-CATATTCAGGCAACCGCACAT----AAAATGACAG 688
|.|| ||| ||.||||||||.||||||||| ..|.||||||
BL03630___ykr 646 ---GTCATCGCTTCGCACATTCAGGCGACCGCACATTCCATGATTGACAG 692
BSNT_02268___ 689 CAGACATTCT----ATAG------------ 702
| |.| |||| |||.
BL03630___ykr 693 C-GTC-TTCTTAAAATATGAAATGAAATAA 720
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.