Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02267 and BL03629

See DNA alignment / Visit BSNT_02267 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:47
# Commandline: needle
#    -asequence pep-align/BSNT_02267___sspD.1.5803.seq
#    -bsequence pep-align/BL03629___sspD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02267___sspD-BL03629___sspD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02267___sspD-BL03629___sspD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02267___sspD
# 2: BL03629___sspD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 65
# Identity:      50/65 (76.9%)
# Similarity:    55/65 (84.6%)
# Gaps:           1/65 ( 1.5%)
# Score: 251.0
# 
#
#=======================================

BSNT_02267___      1 MASRNKLVVPGVEQALDQFKLEVAQEFGVNLGSDTVARANGSVGGEMTKR     50
                     ||..|||:|||.||.|||||.|:||||||.||||:|||:|||||||||||
BL03629___ssp      1 MARTNKLLVPGAEQVLDQFKYEIAQEFGVQLGSDSVARSNGSVGGEMTKR     50

BSNT_02267___     51 LVQQAQSQLNGTTK-     64
                     ||||||:||||... 
BL03629___ssp     51 LVQQAQAQLNGHNDK     65


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