Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02267 and BL03629
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence dna-align/BSNT_02267___sspD.1.5803.seq
# -bsequence dna-align/BL03629___sspD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02267___sspD-BL03629___sspD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02267___sspD-BL03629___sspD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02267___sspD
# 2: BL03629___sspD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 150/199 (75.4%)
# Similarity: 150/199 (75.4%)
# Gaps: 5/199 ( 2.5%)
# Score: 543.0
#
#
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BSNT_02267___ 1 ATGGCGAGCAGAAATAAACTCGTTGTTCCAGGGGTGGAGCAGGCACTAGA 50
|||||.||.|..|||||.|||.|.|||||.||||..|||||||...||||
BL03629___ssp 1 ATGGCAAGAACGAATAAGCTCCTCGTTCCCGGGGCAGAGCAGGTTTTAGA 50
BSNT_02267___ 51 CCAATTTAAACTCGAAGTGGCTCAAGAATTCGGTGTGAACCTTGGTTCTG 100
|||.||.|||..||||.|.||.|||||.|||||.||..|.||.||.||.|
BL03629___ssp 51 CCAGTTCAAATACGAAATCGCCCAAGAGTTCGGCGTCCAGCTCGGCTCGG 100
BSNT_02267___ 101 ATACAGTCGCACGCGCTAACGGCTCTGTAGGCGGAGAAATGACAAAGCGG 150
|..|.|||||.|||.|.|||||.|||||||||||.|||||||||||.||.
BL03629___ssp 101 ACTCGGTCGCTCGCTCAAACGGATCTGTAGGCGGGGAAATGACAAAACGA 150
BSNT_02267___ 151 CTGGTACAGCAAGCACAATCACAATTAAAT-GGCACAACT---AAATAA 195
||.||||||||.||||||.|.|||||.||| ||||.|| | ||||||
BL03629___ssp 151 CTTGTACAGCAGGCACAAGCTCAATTGAATGGGCATAA-TGACAAATAA 198
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