Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02256 and BL03628
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence pep-align/BSNT_02256___ykoW.1.5803.seq
# -bsequence pep-align/BL03628___ykoW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02256___ykoW-BL03628___ykoW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02256___ykoW-BL03628___ykoW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02256___ykoW
# 2: BL03628___ykoW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 817
# Identity: 247/817 (30.2%)
# Similarity: 335/817 (41.0%)
# Gaps: 335/817 (41.0%)
# Score: 1197.5
#
#
#=======================================
BSNT_02256___ 0 -------------------------------------------------- 0
BL03628___yko 1 MTEVLGEYNGWLVLLSYFTAVLAAYTALDLSERVVHTKGRKNIGWLLAGS 50
BSNT_02256___ 1 --MGFGIWSMHFVGMMAVHMEMPMTYEFMPLMAAIGASVSGSFVSLYFVS 48
||.|||||||:||::......|.|:...::.:|.|:.:||.:|.|.|:
BL03628___yko 51 LTMGLGIWSMHFIGMVSFQTAEEMKYDLKFVLLSIVAAFAGSLISFYVVN 100
BSNT_02256___ 49 RNILTYYRLLTGSVVLGASIASMHYIGMSAISRVMIIYEPILFTVSIIIA 98
....|..||..||:.:|.:|||||:|||.|:..:.|:|.|:|:..|..||
BL03628___yko 101 EKKPTNGRLAAGSLAMGCAIASMHFIGMEAMENMTIVYHPVLYAASFAIA 150
BSNT_02256___ 99 IAASFVSLKIFFDLAVKKHSEHLIFYKVVSSIVMGIGISGMHYTGMLAAT 148
|.|||.:||:....|.|..|..::|.|:.|:::||..|||||||||.|||
BL03628___yko 151 IFASFAALKLSVVFAKKTGSFRILFIKIGSALLMGGAISGMHYTGMSAAT 200
BSNT_02256___ 149 -FHKDMAPPGSHMEVQTFHWSIFVTLIIFCIQTLLLFSSHADRKFIKQSE 197
|..|....| :..:.|....|.:.|:...:|..|:|.:..|::.:...|
BL03628___yko 201 LFMADSVDTG-YEGIDTVELGIMIVLVSLMLQCFLIFGAFNDKRLLLHIE 249
BSNT_02256___ 198 RIKDNEQRFQSLIVHNIDAIFILSLEGDIISSNHAGEEMISKFGFSM--- 244
::||||:||||||.||||.|::.||||.::|:|.:|..::.|.|...
BL03628___yko 250 KVKDNEERFQSLINHNIDPIYVFSLEGKLLSANSSGYSLLEKMGIEPERL 299
BSNT_02256___ 245 --------HD----WRNYTSLKVKRLFEQVKKDKQAMNSDSDLITEKGQF 282
|| | |.||:.:|||:|.|:.:...:.:|
BL03628___yko 300 SSVFRQEDHDRLLGW-----------FLQVQNEKQAINRDTAIAIAEKRF 338
BSNT_02256___ 283 HLNITLIPVEVNQELDSIYVICKDMTKQYKAEKEIHRMAHYDSLTDLPNR 332
.||:|||||.|.::||||||||||||.|.:||::||||||||:|||||||
BL03628___yko 339 DLNVTLIPVYVRKQLDSIYVICKDMTNQREAERKIHRMAHYDALTDLPNR 388
BSNT_02256___ 333 RHAISHLTKVLNREHSLHYNTVVFFLDLNRFKVINDALGHNVGDQLLQFA 382
|:|:..|..||.|:.: .|.|.|||||||||.||||||:|||.||..|
BL03628___yko 389 RYAVDRLANVLKRQET---GTAVLFLDLNRFKVFNDALGHDVGDLLLVAA 435
BSNT_02256___ 383 AKRLSSVVPDNGFIARLGGDEFIIILTDANTGTGEADVLARKIIQKFKKP 432
|:||:..||:.|||||||||||||: ......|.|.|::|.:|:.|
BL03628___yko 436 AQRLAHCVPNEGFIARLGGDEFIIV-----APLQGIDQLTRQLISQFETP 480
BSNT_02256___ 433 FKIQDHTLVTSVSIGIAISPKDGTDGLELMKKADMAMYAAKERNKSKYRY 482
|:|::|.|.||||||||:||.|||||.|||:||||||||||.::.|:|||
BL03628___yko 481 FRIKEHRLKTSVSIGIAVSPDDGTDGDELMRKADMAMYAAKHKSVSRYRY 530
BSNT_02256___ 483 YSFSIGNKETVKLNQEMVLREAIENDRFVLHYQPQFSVKKQKMTGAEALI 532
:|.|:..|......:|:.|.
BL03628___yko 531 FSSSLARKNRPSFQKEIELN------------------------------ 550
BSNT_02256___ 533 RLVTPDGQLRPPGEFIGVAEETGLIIDIGKWIIDEACKQARIWHNKGYDL 582
BL03628___yko 550 -------------------------------------------------- 550
BSNT_02256___ 583 SVAINISARQFQSEDLIPLIKDTLNKYQLPPQLLEVEVTESMTMDNLDHS 632
BL03628___yko 550 -------------------------------------------------- 550
BSNT_02256___ 633 KKVLSSLKELGIRISIDDFGTGHSSLSYLKDFPIHRLKIDKSFIDDIQTH 682
BL03628___yko 550 -------------------------------------------------- 550
BSNT_02256___ 683 PKSEQITGAIIAMGHQLSLQVIAEGVENAAQKQLLYEKGCDHLQGFFFSR 732
BL03628___yko 550 -------------------------------------------------- 550
BSNT_02256___ 733 PIPPEQFEQFIIEQPSQ 749
BL03628___yko 550 ----------------- 550
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