Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02253 and BL03627

See DNA alignment / Visit BSNT_02253 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:46
# Commandline: needle
#    -asequence pep-align/BSNT_02253___ykoV.1.5803.seq
#    -bsequence pep-align/BL03627___ykoV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02253___ykoV-BL03627___ykoV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02253___ykoV-BL03627___ykoV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02253___ykoV
# 2: BL03627___ykoV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     222/296 (75.0%)
# Similarity:   259/296 (87.5%)
# Gaps:           8/296 ( 2.7%)
# Score: 1128.0
# 
#
#=======================================

BSNT_02253___      1 MHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKEDHAPIKYEKVCTN     50
                     ||||||||||||||||||||:||||||||||||||||..|||:|||.|||
BL03627___yko      1 MHTMWKGSISFGLVNIPIKLFAATEDKDIKLRSLHKECRAPIQYEKKCTN     50

BSNT_02253___     51 CEKTLSPDEIVKGYEYVKGKYVVLTDEDLKSLKQEHEEKAVEIVDFVQLQ    100
                     |.:.::||:|||||||||||||||:|::||.||:|.|:|||||||||||:
BL03627___yko     51 CHQEIAPDDIVKGYEYVKGKYVVLSDDELKQLKEEQEDKAVEIVDFVQLK    100

BSNT_02253___    101 EIDPIYFNRSYFVGPGDNGTKAYTLLREALRSTGKIGIANMTIRSKQQLA    150
                     |||||||||||||||||||.|||:|||||||.|.|||||:||||||:|||
BL03627___yko    101 EIDPIYFNRSYFVGPGDNGVKAYSLLREALRKTEKIGIAHMTIRSKKQLA    150

BSNT_02253___    151 ILRVYENCIVMESIHYPDEVRSAAHVPGVPDQSNVNDKELQTAITLIDEL    200
                     |||||||||:|||||||||||:||||||||:::.||:|||||||:|||||
BL03627___yko    151 ILRVYENCILMESIHYPDEVRNAAHVPGVPEETAVNEKELQTAISLIDEL    200

BSNT_02253___    201 TAEFEPEKYEDTYRQALLQRVNDKLENKETAVTPD--KAPPREDVIDLVS    248
                     |..|.||:||||||.||:.::.:|:::.| .|||:  .|.||||||||||
BL03627___yko    201 TTTFAPEQYEDTYRIALMDKIKEKIDHNE-GVTPNAGAAAPREDVIDLVS    249

BSNT_02253___    249 ALQASIDRTRRPNRETPAAAPAQAAEPKGAGDKKRKTTRKKASGTS    294
                     ||||||:||:.|:||   ||.|.||  ||..:||:||:|||||...
BL03627___yko    250 ALQASIERTKGPDRE---AAKAPAA--KGTAEKKKKTSRKKASEAK    290


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