Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05102 and BL03619

See DNA alignment / Visit BSNT_05102 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:13
# Commandline: needle
#    -asequence pep-align/BSNT_05102___yvaN.1.5803.seq
#    -bsequence pep-align/BL03619___rghR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05102___yvaN-BL03619___rghR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05102___yvaN-BL03619___rghR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05102___yvaN
# 2: BL03619___rghR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 137
# Identity:      79/137 (57.7%)
# Similarity:   102/137 (74.5%)
# Gaps:           6/137 ( 4.4%)
# Score: 390.5
# 
#
#=======================================

BSNT_05102___      1 MESFGEQLRALREERKLTVNQLATYSGVSAAGISRIENGKRGVPKPATIK     50
                     |.:||..||.|||.:||||||||.|||||:|||||||||||||||||||:
BL03619___rgh      1 MTNFGHHLRQLRERKKLTVNQLAMYSGVSSAGISRIENGKRGVPKPATIR     50

BSNT_05102___     51 KLAEALKIPYEGLMYKAGYI--EEVHEARAPYETKCKLLEKAEAYDLKNL     98
                     |||:|||:|||.||..||||  ..|.|||:.|::   :.:....|||::|
BL03619___rgh     51 KLADALKVPYEELMASAGYISASTVQEARSSYDS---IYDIVSQYDLEDL     97

BSNT_05102___     99 ALLENEKWQYLNKEDLLMLDHYFSFISDEAKKRSADD    135
                     :|.::|||:.|:|:|:..||.||.|:..||..|:.: 
BL03619___rgh     98 SLFDSEKWKVLSKKDIENLDKYFDFLVQEASSRNKN-    133


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