Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05122 and BL03616

See DNA alignment / Visit BSNT_05122 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:14
# Commandline: needle
#    -asequence pep-align/BSNT_05122___yvbI.1.5803.seq
#    -bsequence pep-align/BL03616___yvbI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05122___yvbI-BL03616___yvbI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05122___yvbI-BL03616___yvbI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05122___yvbI
# 2: BL03616___yvbI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:      98/259 (37.8%)
# Similarity:   147/259 (56.8%)
# Gaps:          27/259 (10.4%)
# Score: 449.0
# 
#
#=======================================

BSNT_05122___      1 MYCPQCGHQTDGGNFCEKCGSPLPGQS-GYQHAAQT------GAAAKQAA     43
                     |.|.:||||||||.|||:|||.|.|.| |.:.||:|      ..|||||:
BL03616___yvb      1 MTCSKCGHQTDGGKFCEQCGSSLAGGSDGGKGAAETPQAARYAEAAKQAS     50

BSNT_05122___     44 KQFGSFVLSVLKRPYQECKTTGGEQLISAIITMVLFSLLTPLMFYI---L     90
                     ..:.|:.|.|||||:.|.|..|.:.::::|.|||:|:|..|||||.   .
BL03616___yvb     51 SMYFSYCLKVLKRPFIEMKNAGEQHVLNSITTMVIFALSVPLMFYFGLKG    100

BSNT_05122___     91 FSDGPGSAS-----------FTAIFLEPTIYFILFLFGLHACIFFALKIA    129
                     |.|..|..|           |..|.::|.:.|.:::|.|....:..::|.
BL03616___yvb    101 FFDAMGDYSGVFGRSYAMPTFFDIVVKPAVTFAIYIFLLFVFTYAGVRIR    150

BSNT_05122___    130 GNQVSFKDSFSRFGAFLIPFTAILILALFFFLLHTDICFTILAVGLIGAF    179
                     |.|.:||:...||||.||||.|:|:.||....:.|.:...:|...|.|..
BL03616___yvb    151 GVQAAFKEVLGRFGAVLIPFVALLLAALLLSFMQTGLFIYVLFFALCGIA    200

BSNT_05122___    180 FAIPPAMLGSYQHSYKGKIDVIYSTIVIYLIICVTFQLIIEHYVKEIFRY    229
                     |.||||::.||....:|.:|.||:|:::||:..::.:::.:.:::.|.|.
BL03616___yvb    201 FLIPPAVISSYHEKAEGAVDTIYATLIVYLLTFMSVRIMGDLFLEYIGRI    250

BSNT_05122___    230 ------MLF    232
                           .||
BL03616___yvb    251 GGSILGRLF    259


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