Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05169 and BL03613

See DNA alignment / Visit BSNT_05169 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:17
# Commandline: needle
#    -asequence pep-align/BSNT_05169___yvfH.1.5803.seq
#    -bsequence pep-align/BL03613___yvfH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05169___yvfH-BL03613___yvfH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05169___yvfH-BL03613___yvfH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05169___yvfH
# 2: BL03613___yvfH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 563
# Identity:     457/563 (81.2%)
# Similarity:   517/563 (91.8%)
# Gaps:           0/563 ( 0.0%)
# Score: 2368.0
# 
#
#=======================================

BSNT_05169___      1 MQWTQAYTPIGGNLLLSALAALVPIIFFFWALAIKRMKGYTAGLATLGIA     50
                     |.|||.|||:|.:||||:||||:||::||||||||||||:||||.||.||
BL03613___yvf      1 MGWTQDYTPLGNSLLLSSLAALIPILYFFWALAIKRMKGHTAGLTTLLIA     50

BSNT_05169___     51 LIIAVLVYRMPAEKALMSATQGAVYGLLPIGWIIVTSVFLYKITVKTGQF    100
                     |::||.||.|||::|:|||:||||||||||||||||||||||:|||||||
BL03613___yvf     51 LVLAVFVYGMPAQQAVMSASQGAVYGLLPIGWIIVTSVFLYKLTVKTGQF    100

BSNT_05169___    101 DIIRSSVLSITDDRRLQALLIAFSFGAFLEGAAGFGAPVAISAALLVGLG    150
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
BL03613___yvf    101 EIIRSSVLSITDDRRLQALLIAFSFGAFLEGAAGFGAPVAISAALLVGLG    150

BSNT_05169___    151 FNPLYAAGICLIANTAPVAFGAIGIPITAVEGPTGIPAMEISQMVGRQLP    200
                     |||||||||||||||||||||||||||.|||||||||||:||:|||||||
BL03613___yvf    151 FNPLYAAGICLIANTAPVAFGAIGIPIIAVEGPTGIPAMDISKMVGRQLP    200

BSNT_05169___    201 FLSVFIPLYLIIIMSGFRKALEIWPAILVSGVSFAVVQYLSSNFLGPELP    250
                     |||||||.|||||||||::|||:.||||||||||||.||:||||||||||
BL03613___yvf    201 FLSVFIPFYLIIIMSGFKRALEVLPAILVSGVSFAVTQYVSSNFLGPELP    250

BSNT_05169___    251 DVLSALVSMAALAVFLKWWKPKTAFRFAGEQESAASIETARTSPAAPAYS    300
                     |:|||:||:.|||||||:|||||.|||:.|:|.||:.|..:......:||
BL03613___yvf    251 DILSAIVSLIALAVFLKFWKPKTTFRFSQEKEMAAAAEAQQLEHQKASYS    300

BSNT_05169___    301 GGQIFKAWSPFLLLTAMISVWGIPSVKSALTGHYEGSAAFLKWLNAVGEK    350
                     .|||||||:||||||||:|:|||||||.|||||||||...|.::|.:|.:
BL03613___yvf    301 AGQIFKAWTPFLLLTAMVSIWGIPSVKQALTGHYEGSNPLLLFINDIGGR    350

BSNT_05169___    351 LTFAPGVPFLNNQIVNADGTPIEAVYKLEVLGSAGTAILIAAVLSKFITA    400
                     ||||||||||:|||::..|.|:||:|||::.|||||||||||||:||:|.
BL03613___yvf    351 LTFAPGVPFLHNQILDGSGKPLEALYKLDLAGSAGTAILIAAVLTKFVTG    400

BSNT_05169___    401 ISWKDWGTVFKETVQELKLPILTIASVVGFAYVTNSSGMSTTLGMTLALT    450
                     :.||:||.||.::::||..||||||||||||||||||||||||||:||:|
BL03613___yvf    401 MPWKEWGAVFTDSLKELGKPILTIASVVGFAYVTNSSGMSTTLGMSLAMT    450

BSNT_05169___    451 GSMFTFFSPVLGWLGVFITGSDTSANLLFGNLQKVTALSVGMDPVLSVAA    500
                     ||||.|||||||||||||||||||||||||:|||:||.||||:|||||||
BL03613___yvf    451 GSMFAFFSPVLGWLGVFITGSDTSANLLFGSLQKMTAQSVGMEPVLSVAA    500

BSNT_05169___    501 NSSGGVTGKMISPQSIAVACAAVGLAGKESDLFRFTIKHSLFLLLLVCII    550
                     ||||||||||||||||||||||||||||||||.|||:|||||||.|||:|
BL03613___yvf    501 NSSGGVTGKMISPQSIAVACAAVGLAGKESDLLRFTLKHSLFLLFLVCMI    550

BSNT_05169___    551 TFLQHHIFSWMIP    563
                     ||||||:||||||
BL03613___yvf    551 TFLQHHLFSWMIP    563


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.