Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05169 and BL03613
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence dna-align/BSNT_05169___yvfH.1.5803.seq
# -bsequence dna-align/BL03613___yvfH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05169___yvfH-BL03613___yvfH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05169___yvfH-BL03613___yvfH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05169___yvfH
# 2: BL03613___yvfH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1742
# Identity: 1291/1742 (74.1%)
# Similarity: 1291/1742 (74.1%)
# Gaps: 100/1742 ( 5.7%)
# Score: 4697.0
#
#
#=======================================
BSNT_05169___ 1 ATGCAATGGACACAGGCATATACGCCTATAGGGGGA--AATTTGCTATTA 48
|||..||||||.||.|..|||||.||..| ||||| |.||||||..|.
BL03613___yvf 1 ATGGGATGGACGCAAGATTATACTCCGCT--GGGGAACAGTTTGCTGCTC 48
BSNT_05169___ 49 TCAGCGCTTGCCGCACTTGTACCGATTATTTTCTTTTTT-TGGGCACTCG 97
||..|||||||.||.|||.|||||||| ||.|.|||||| |||||.||.|
BL03613___yvf 49 TCTTCGCTTGCAGCGCTTATACCGATT-TTGTATTTTTTCTGGGCTCTGG 97
BSNT_05169___ 98 CGATTAAACGGATGAAGGGGTATACAGCTGGCTTGGCCACATTGGGGATC 147
|.||.|||.|.|||||.|||.|||||||.||||||.|.||.|||..||||
BL03613___yvf 98 CAATCAAAAGAATGAAAGGGCATACAGCAGGCTTGACGACTTTGCTGATC 147
BSNT_05169___ 148 GCCCTTATCATTGCTGTATTGGTTTATCGG-ATGCCGGCGGAAAAAGCGC 196
||.||..|..|.||.||.||.||.|| ||| |||||.||..|..|.||..
BL03613___yvf 148 GCACTCGTGCTGGCCGTTTTCGTATA-CGGCATGCCCGCTCAGCAGGCTG 196
BSNT_05169___ 197 TGATGTCCGCGACACAAGGAGCCGTATACGGATTGTTGCCGATCGGCTGG 246
|||||||.||..|.|||||.||.||.|||||..||.||||||||||||||
BL03613___yvf 197 TGATGTCGGCTTCGCAAGGCGCGGTTTACGGGCTGCTGCCGATCGGCTGG 246
BSNT_05169___ 247 ATCATTGTGACGTCTGTTTTTTTGTATAAAATCACTGTGAAAACGGGACA 296
||.||.|||||.||.|||||||||||.||..|.||.||||||||.||.||
BL03613___yvf 247 ATTATCGTGACTTCAGTTTTTTTGTACAAGCTTACGGTGAAAACCGGCCA 296
BSNT_05169___ 297 GTTTGATATCATTCGCAGCTCTGTTCTCTCGATTACTGATGACCGACGGC 346
.|||||.|||||..|.||.||.||..|.|||||.||.||||||||.||..
BL03613___yvf 297 ATTTGAAATCATCAGGAGTTCGGTATTGTCGATCACAGATGACCGCCGTT 346
BSNT_05169___ 347 TTCAAGCTCTCTTGATCGCTTTTTCATTCGGGGCTTTTTTAGAAGGGGCA 396
|.|||||.||.|||||.||.||||||||||||||.|||||.|||||.||.
BL03613___yvf 347 TGCAAGCACTTTTGATAGCGTTTTCATTCGGGGCATTTTTGGAAGGTGCG 396
BSNT_05169___ 397 GCAGGCTTCGGAGCGCCGGTCGCCATTTCTGCCGCGCTGCTGGTCGGTCT 446
|||||||||||.||.||.|||||.||.||.||.||..||||.|||||.||
BL03613___yvf 397 GCAGGCTTCGGCGCCCCTGTCGCGATATCGGCTGCATTGCTTGTCGGCCT 446
BSNT_05169___ 447 CGGCTTTAATCCTCTTTATGCTGCGGGGATCTGTTTGATCGCCAATACGG 496
||||||||||||..|.|||||.|||||.||.||..||||||||||.||||
BL03613___yvf 447 CGGCTTTAATCCGTTGTATGCGGCGGGCATATGCCTGATCGCCAACACGG 496
BSNT_05169___ 497 CGCCGGTTGCCTTTGGGGCGATTGGGATTCCAATTACAGCCGTAGAAGGG 546
||||.||.||.||.||.|||||.||.||.||.||||..||.||.||||||
BL03613___yvf 497 CGCCTGTCGCTTTCGGAGCGATCGGCATCCCGATTATCGCGGTTGAAGGG 546
BSNT_05169___ 547 CCGACAGGGATTCCGGCGATGGAGATTTCGCAAATGGTCGGGCGGCAGCT 596
|||||.||||||||.||||||||.|||||..||||||||||.||.|||||
BL03613___yvf 547 CCGACTGGGATTCCTGCGATGGACATTTCAAAAATGGTCGGACGCCAGCT 596
BSNT_05169___ 597 GCCGTTTTTATCCGTATTTATTCCTCTTTATTTAATCATCATCATGAGCG 646
||||||||||||.|||||||||||..|||||||.||||||||||||||||
BL03613___yvf 597 GCCGTTTTTATCTGTATTTATTCCGTTTTATTTGATCATCATCATGAGCG 646
BSNT_05169___ 647 GGTTCAGGAAA--GCCTTGGAAAT-CTGGCCGGCGATTCTCGTATCCGGT 693
|.|||| ||| ||.||||||.| || ||||||.||||||||.||.||.
BL03613___yvf 647 GTTTCA--AAAGGGCTTTGGAAGTGCT-GCCGGCCATTCTCGTGTCGGGC 693
BSNT_05169___ 694 GTTTCCTTTGCTGTTGTTCAATATCTCAGTTCCAATTTTTTAGGGCCTGA 743
||.||.|||||.|||...||.|||.|.||.||.||.||..|.||||||||
BL03613___yvf 694 GTCTCTTTTGCCGTTACACAGTATGTAAGCTCAAACTTCCTGGGGCCTGA 743
BSNT_05169___ 744 GCTGCCCGATGTTTTGTCAGCTCTTGTTTCAATGGCT----GCGCTTGCT 789
|||.||.|||.|||||||||||.|.|| ||.||| ||.||.|||
BL03613___yvf 744 GCTCCCGGATATTTTGTCAGCTATCGT----ATCGCTTATCGCTCTCGCT 789
BSNT_05169___ 790 GTGTTTTTGAAATGGTGGAAGCCGAAAACAGCATTCCGGTTTGCCGGTGA 839
||.||.||.||||..|||||.||||||||..|||||.|.||..|
BL03613___yvf 790 GTATTCTTAAAATTTTGGAAACCGAAAACGACATTCAGATTCTC------ 833
BSNT_05169___ 840 ACAAGAGTCGGCCGCCTCAATTGAAACGGCGCGCACAAGTCCGGCGGC-- 887
|||||| ||..||||.||| |||...|| |||.|||
BL03613___yvf 834 ACAAGA------------AAAGGAAATGGC-CGCTGCAG--CGGAGGCGC 868
BSNT_05169___ 888 --------------------GCCTGCATACAGCGGC-GGACAGATTTTTA 916
|||| ||||| .|||| ||.||||||||.|
BL03613___yvf 869 AGCAGCTTGAACATCAAAAGGCCT-CATAC-TCGGCGGGGCAGATTTTCA 916
BSNT_05169___ 917 AGGCTTGGTCGCCATTTCTGCTGCTGACGGCGATGATTTCCGTATGGGGC 966
||||.|||.|.||.|||.|||||||.|||||.|||.|.|||.|.|||||.
BL03613___yvf 917 AGGCATGGACACCGTTTTTGCTGCTCACGGCAATGGTCTCCATCTGGGGA 966
BSNT_05169___ 967 ATTCCATCTGTCAAATCTGCACTGACCGGGCATTATGAAGGCTC------ 1010
|||||||||||||||...||..||||.||.|||||||||||.||
BL03613___yvf 967 ATTCCATCTGTCAAACAGGCCTTGACGGGCCATTATGAAGGTTCAAATCC 1016
BSNT_05169___ 1011 --TGCGGC-GTTCTTGAAGTGGCTGAATGCTGTTGGAGAAAAACTGACTT 1057
|||.|| |||| .|.||||.|.|.||.|..|..|||||.|
BL03613___yvf 1017 ATTGCTGCTGTTC---------ATAAATGATATCGGCGGCAGGCTGACGT 1057
BSNT_05169___ 1058 TTGCCCCCGGTGTGCCTTTTTTGAACAATCAGATTGTCAATGCTGACGGT 1107
||||.|||||.||||||||||||.|||||||.|||.||.|||.|..|||.
BL03613___yvf 1058 TTGCACCCGGCGTGCCTTTTTTGCACAATCAAATTCTCGATGGTTCCGGA 1107
BSNT_05169___ 1108 ACGCCGATTGAGGCGGTTTACAAGCTTGAGGT-GCTTGGTTCGGCCGGCA 1156
|..|||.|||||||..|||||||.|||||..| || |||.|||||.||.|
BL03613___yvf 1108 AAACCGCTTGAGGCTCTTTACAAACTTGATCTCGC-TGGATCGGCAGGTA 1156
BSNT_05169___ 1157 CCGCGATATTGATTGCCGCAGTGCTGTCAAAGTTCATCAC-GGCGATTTC 1205
|.|||||..||||||||||.||.|||.|||||||..|||| ||| ||..|
BL03613___yvf 1157 CGGCGATCCTGATTGCCGCCGTACTGACAAAGTTTGTCACAGGC-ATGCC 1205
BSNT_05169___ 1206 GTGGAAAGACTGGGGAACCGTTTTTAAAGAAACAGTCCAGGAATT---GA 1252
.||||||||.|||||..||||.||||.|||..|..|..|||||.| .|
BL03613___yvf 1206 TTGGAAAGAATGGGGCGCCGTATTTACAGATTCGCTGAAGGAACTCGGCA 1255
BSNT_05169___ 1253 AGCTTCCGATTTTGACCATCGCTTCTGTCGTTGGTTTTGCCTATGTCACC 1302
|| |||||.||.||.||||||||.|||||.||||||||||||||||||
BL03613___yvf 1256 AG---CCGATATTAACGATCGCTTCCGTCGTCGGTTTTGCCTATGTCACC 1302
BSNT_05169___ 1303 AACTCCTCGGGAATGAGCACGACACTCGGGATGACACTCGCGCTGACAGG 1352
||.||.|||||.||||||||.|||||.||.|||.|.||.|||.||||.||
BL03613___yvf 1303 AATTCTTCGGGCATGAGCACAACACTGGGCATGTCCCTTGCGATGACCGG 1352
BSNT_05169___ 1353 TTCGATGTTTACCTTCTTTTCGCCCGTCCTCGGCTGGCTCGGCGTCTTCA 1402
|||.|||||..|.||||||||.|||||.||||||||||||||.||.||.|
BL03613___yvf 1353 TTCAATGTTCGCATTCTTTTCTCCCGTTCTCGGCTGGCTCGGTGTGTTTA 1402
BSNT_05169___ 1403 TTACCGGCTCGGATACTTCCGCCAACCTGCTGTTCGGCAACCTGCAGAAA 1452
|.|||||.||.|||||.||.|||||..||||||||||.|.||||||.|||
BL03613___yvf 1403 TAACCGGTTCAGATACGTCGGCCAATTTGCTGTTCGGAAGCCTGCAAAAA 1452
BSNT_05169___ 1453 GTCACCGCATTATCAGTCGGCATGGACCCCGTTCTGTCTGTGGCCGCCAA 1502
.|.||.|||...||||||||.|||||.||.||.|||||||||||.|||||
BL03613___yvf 1453 ATGACGGCACAGTCAGTCGGAATGGAGCCGGTGCTGTCTGTGGCGGCCAA 1502
BSNT_05169___ 1503 TTCTTCAGGCGGTGTCACAGGAAAAATGATTTCGCCGCAGTCGATAGCGG 1552
.|||||||||||.|||||||||||||||||.||.|||||||||||.||||
BL03613___yvf 1503 CTCTTCAGGCGGCGTCACAGGAAAAATGATCTCTCCGCAGTCGATTGCGG 1552
BSNT_05169___ 1553 TGGCGTGCGCTGCCGTAGGACTCGCCGGAAAGGAGTCAGATCTT--TTCC 1600
|.||.|||||.|||||.|||||.||.||||||||.||.|| ||| || |
BL03613___yvf 1553 TCGCCTGCGCAGCCGTCGGACTGGCAGGAAAGGAATCCGA-CTTGCTT-C 1600
BSNT_05169___ 1601 GCTTTACCATTAAACACAGTCTGTTTTTGCTGCTGCTCGTTTGTATCATC 1650
|||||||..|.|||||||||||||||.|.||..|.||||||||.||.|||
BL03613___yvf 1601 GCTTTACACTGAAACACAGTCTGTTTCTTCTTTTCCTCGTTTGCATGATC 1650
BSNT_05169___ 1651 ACCTTTTTGCAGCATCACATATTCAGCTGGATGATTCCTTAA 1692
||.||..||||||||||..|.||....||||||||.||.|||
BL03613___yvf 1651 ACTTTCCTGCAGCATCATCTGTTTTCGTGGATGATCCCGTAA 1692
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