Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05484 and BL03610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence pep-align/BSNT_05484___ywrO.1.5803.seq
# -bsequence pep-align/BL03610___ywrO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05484___ywrO-BL03610___ywrO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05484___ywrO-BL03610___ywrO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05484___ywrO
# 2: BL03610___ywrO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 175
# Identity: 114/175 (65.1%)
# Similarity: 137/175 (78.3%)
# Gaps: 1/175 ( 0.6%)
# Score: 614.0
#
#
#=======================================
BSNT_05484___ 1 MKILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKE 50
||:||||.||:||.||||:|:|:.|.....||:||||:|||||||||.||
BL03610___ywr 1 MKVLVLAFHPNMEQSVVNRAFADTLKDAPGITLRDLYQEYPDEAIDVEKE 50
BSNT_05484___ 51 QQLCEEYDRIVFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKE 100
|:||||:|||||||||||||||||||||.|.||.||||:|:.|.||.|||
BL03610___ywr 51 QKLCEEHDRIVFQFPLYWYSSPPLLKKWLDHVLLYGWAYGTNGTALRGKE 100
BSNT_05484___ 101 PMLAVSTGSEAEKYQAGGANHYSISELLKPFQATSNLIGMKYLPPYVFYG 150
.|:|||.|:..|.|||||:|||:|||||:|||||||.||..||||||||.
BL03610___ywr 101 FMVAVSAGAPEEAYQAGGSNHYAISELLRPFQATSNFIGTTYLPPYVFYQ 150
BSNT_05484___ 151 VNYAAAEDISHSAKRLAEYIQQPFV 175
...|...:::..|.:..|::.:.|
BL03610___ywr 151 AGTAGKSELAEGATQYREHVLKSF- 174
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