Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00995 and BL03604

See DNA alignment / Visit BSNT_00995 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_00995___ydhJ.1.5803.seq
#    -bsequence pep-align/BL03604___ydhJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00995___ydhJ-BL03604___ydhJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00995___ydhJ-BL03604___ydhJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00995___ydhJ
# 2: BL03604___ydhJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity:     160/331 (48.3%)
# Similarity:   208/331 (62.8%)
# Gaps:          24/331 ( 7.3%)
# Score: 760.5
# 
#
#=======================================

BSNT_00995___      1 MEISDVIYGHHHIDGVLEELIKSAPVQRLKGIYQGGASFLVNQKWNVTRY     50
                                 ::.||.:||:|..|||||||:|||||||||..||::|.
BL03604___ydh      1 ------------MEPVLTDLIRSKAVQRLKGIHQGGASFLVNPAWNISRC     38

BSNT_00995___     51 EHCIGVMLLIKKLGGTIEEQIAGLLHDVSHTAFSHVVDVVFENQAEDYHE    100
                     ||.|||||||::|||::|||||||||||||||||||.|.||..:.|||||
BL03604___ydh     39 EHSIGVMLLIRRLGGSLEEQIAGLLHDVSHTAFSHVADDVFNMENEDYHE     88

BSNT_00995___    101 NIFQQVIVHSEIPDILQKHGYHTEELLSDDSRWTLLEQPAPELCADRTDY    150
                     .:|:|.:..|:|..||..:|:|.|::|.|:.:|||||||||.|||||.||
BL03604___ydh     89 QMFRQWVKQSDISGILHTYGFHDEDILYDEQKWTLLEQPAPSLCADRIDY    138

BSNT_00995___    151 TLRDIYRYGHINLHEAQTFLD-HLIVRNGRMFPDSIEAGEWFVSVYYKEV    199
                     ||||...||..:..|...||: .|.|..|.:...|.|..|||..:||:||
BL03604___ydh    139 TLRDSLAYGFGDPVEIGRFLETGLTVAEGEICCTSAEHAEWFARLYYQEV    188

BSNT_00995___    200 IDFFLNPVNVYGYEYLARALKAALRHDVISAEDLLKTDQEVLNIL--RAS    247
                     ||||:||:|:|....|::.||.||...||:..|..|||.|:|.:|  :|.
BL03604___ydh    189 IDFFMNPLNIYALCTLSQMLKEALDMRVIAGRDFFKTDTELLAMLKQKAR    238

BSNT_00995___    248 KNEEVLSLLTS---IHPGIQVIEDDIQYDFHQKKKMRLIDPSIFFDGEWI    294
                     ..|.::.|.|:   :..|     |:..:.|||..|:|.|||.:..:|..|
BL03604___ydh    239 FRETLVKLSTASKRVKQG-----DEGDFTFHQTLKVRWIDPKVAVNGRKI    283

BSNT_00995___    295 KSSDASEKVRKMGEAAYQKAKKGVYIKILNQ    325
                     .:|..|:.|..|.|.|....|||.|:|... 
BL03604___ydh    284 PASTLSKNVLLMKETAIAAMKKGAYVKAAQ-    313


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