Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05282 and BL03603

See DNA alignment / Visit BSNT_05282 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence pep-align/BSNT_05282___yvcT.1.5803.seq
#    -bsequence pep-align/BL03603___yvcT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05282___yvcT-BL03603___yvcT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05282___yvcT-BL03603___yvcT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05282___yvcT
# 2: BL03603___yvcT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity:     218/326 (66.9%)
# Similarity:   263/326 (80.7%)
# Gaps:           5/326 ( 1.5%)
# Score: 1145.0
# 
#
#=======================================

BSNT_05282___      1 MKPFVFITKPIPEEIEAFIGEHCRYEVW-QEDTLPSDVLFEKLKEAEGLL     49
                     |||||::|||:|:|||..:.|||.||:| ..:.:|...|.||:|||:|||
BL03603___yvc      1 MKPFVYVTKPVPKEIEEMLAEHCEYEIWTSRERIPRTTLLEKIKEADGLL     50

BSNT_05282___     50 TSGTSGPSINRELLEHAPKLKVVSNQSVGYDNFDIEAMKERGVIGTHTPY     99
                     ||||   .|:||||.:|.|||:|||.||||||||||||||:.||||||||
BL03603___yvc     51 TSGT---KIDRELLSNALKLKIVSNNSVGYDNFDIEAMKEKSVIGTHTPY     97

BSNT_05282___    100 TLDDTVADLAFSLILSSARRVAELDRFVRAGKWGTVE-EEALFGIDVHHQ    148
                     .||||||||||.||||||||:|||||:||.|||...| :|:|||.||||:
BL03603___yvc     98 ILDDTVADLAFGLILSSARRIAELDRYVREGKWTKSEDDESLFGSDVHHR    147

BSNT_05282___    149 TLGIIGMGRIGEQAARRAKFGFDMEVLYHNRHRKQETEDSIGVKYAELDT    198
                     |||||||||||||.|:||..||||||||::|.||.:||...|..|.....
BL03603___yvc    148 TLGIIGMGRIGEQVAKRAALGFDMEVLYYSRSRKPDTEKKTGAVYTGFHE    197

BSNT_05282___    199 LLERSDFILLITPLTDETYHMIGEREFKLMKDSAIFVNISRGKTVDEKAL    248
                     ||||||||:|:||||||||.:|||.|||.||.|:||:||||||||||:||
BL03603___yvc    198 LLERSDFIVLVTPLTDETYRLIGEAEFKKMKPSSIFINISRGKTVDEQAL    247

BSNT_05282___    249 IRALQEGWIRGAGLDVYEKEPVSQDNPLLQLDNVTLLPHIGSATAKVRFN    298
                     |:||:||||:||||||:||||:.:|||||.|.||||:|||||:|.....|
BL03603___yvc    248 IQALKEGWIKGAGLDVFEKEPIEKDNPLLSLSNVTLVPHIGSSTHVTHVN    297

BSNT_05282___    299 MCKQAAENMIAAIQGQTPKNLTREFQ    324
                     |.|.|.:|:|..:||:.||::.:|.:
BL03603___yvc    298 MLKSAVQNLIDGLQGKRPKDIVKELR    323


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