Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00926 and BL03602
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence pep-align/BSNT_00926___ydfF.1.5803.seq
# -bsequence pep-align/BL03602___ydfF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00926___ydfF-BL03602___ydfF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00926___ydfF-BL03602___ydfF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00926___ydfF
# 2: BL03602___ydfF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity: 115/236 (48.7%)
# Similarity: 160/236 (67.8%)
# Gaps: 15/236 ( 6.4%)
# Score: 587.5
#
#
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BSNT_00926___ 1 --MNPNIAKISSLLSDPSRSSILLSLMDGRIHPAGELAYLANIKPQTASF 48
:|||||:::.|::||||::||.:|:|.|.:.|.|||..|.||.|||||
BL03602___ydf 1 MNVNPNIAEVAKLVTDPSRAAILTALLDDRYYTATELAGYAGIKQQTASF 50
BSNT_00926___ 49 HLNKLLEAKLISVEKHGRHRYYRLSDSDAANVIEQLLHIAPKAKVKSLKE 98
||:|||:|::::..|.||||||||.:...|..:|.||:|||.|:::|.::
BL03602___ydf 51 HLSKLLDAEMLTCRKQGRHRYYRLKNGKIAQSLETLLNIAPPAEIRSFRQ 100
BSNT_00926___ 99 SKEKKDLHFARTCYDHLAGYVGVQMAHSLVEQGMLKKVDLNFEVTSEGAL 148
|.|.:.:..||||||||||.:||.:|..|||.|:||:.:..|.||.||..
BL03602___ydf 101 SAEDRAVRKARTCYDHLAGSLGVTLADRLVEMGVLKEEETAFTVTEEGEA 150
BSNT_00926___ 149 FFSKLGINEEQQRNKRRAFARCCLDWSERQHHIAGALGNALLVRMLEEEW 198
|..:|||:..:.:.|||:|...|||||||:||||||||:|||...:...|
BL03602___ydf 151 FLKELGIDVREVKKKRRSFCHKCLDWSERRHHIAGALGSALLDAFIRMGW 200
BSNT_00926___ 199 IVRMPKTRAIRITQSG--------KIAFEKHLNVKI 226
|.|.|.|||:.:|.:| .|:.||:
BL03602___ydf 201 IERRPHTRAVAVTPAGAKELYRLFHISIEKN----- 231
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