Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00926 and BL03602

See DNA alignment / Visit BSNT_00926 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_00926___ydfF.1.5803.seq
#    -bsequence pep-align/BL03602___ydfF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00926___ydfF-BL03602___ydfF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00926___ydfF-BL03602___ydfF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00926___ydfF
# 2: BL03602___ydfF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity:     115/236 (48.7%)
# Similarity:   160/236 (67.8%)
# Gaps:          15/236 ( 6.4%)
# Score: 587.5
# 
#
#=======================================

BSNT_00926___      1 --MNPNIAKISSLLSDPSRSSILLSLMDGRIHPAGELAYLANIKPQTASF     48
                       :|||||:::.|::||||::||.:|:|.|.:.|.|||..|.||.|||||
BL03602___ydf      1 MNVNPNIAEVAKLVTDPSRAAILTALLDDRYYTATELAGYAGIKQQTASF     50

BSNT_00926___     49 HLNKLLEAKLISVEKHGRHRYYRLSDSDAANVIEQLLHIAPKAKVKSLKE     98
                     ||:|||:|::::..|.||||||||.:...|..:|.||:|||.|:::|.::
BL03602___ydf     51 HLSKLLDAEMLTCRKQGRHRYYRLKNGKIAQSLETLLNIAPPAEIRSFRQ    100

BSNT_00926___     99 SKEKKDLHFARTCYDHLAGYVGVQMAHSLVEQGMLKKVDLNFEVTSEGAL    148
                     |.|.:.:..||||||||||.:||.:|..|||.|:||:.:..|.||.||..
BL03602___ydf    101 SAEDRAVRKARTCYDHLAGSLGVTLADRLVEMGVLKEEETAFTVTEEGEA    150

BSNT_00926___    149 FFSKLGINEEQQRNKRRAFARCCLDWSERQHHIAGALGNALLVRMLEEEW    198
                     |..:|||:..:.:.|||:|...|||||||:||||||||:|||...:...|
BL03602___ydf    151 FLKELGIDVREVKKKRRSFCHKCLDWSERRHHIAGALGSALLDAFIRMGW    200

BSNT_00926___    199 IVRMPKTRAIRITQSG--------KIAFEKHLNVKI    226
                     |.|.|.|||:.:|.:|        .|:.||:     
BL03602___ydf    201 IERRPHTRAVAVTPAGAKELYRLFHISIEKN-----    231


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