Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03882 and BL03600

See DNA alignment / Visit BSNT_03882 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence pep-align/BSNT_03882___yrdF.1.5803.seq
#    -bsequence pep-align/BL03600___yrdF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03882___yrdF-BL03600___yrdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03882___yrdF-BL03600___yrdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03882___yrdF
# 2: BL03600___yrdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 92
# Identity:      41/92 (44.6%)
# Similarity:    60/92 (65.2%)
# Gaps:           2/92 ( 2.2%)
# Score: 215.0
# 
#
#=======================================

BSNT_03882___      1 MRKIMIDGRDFENIEVLHDVLKDKLDFPDYYGGNLDALWDCLTGWVDLPL     50
                     |:::.:.|....::..||..||::|:.|||||.|||||||||||||.:||
BL03600___yrd      1 MKQVTLKGEKIRSVSDLHKELKEQLELPDYYGENLDALWDCLTGWVGMPL     50

BSNT_03882___     51 TLVLINFEFSKKFLGSYANDVLEVLQEAQEELKDEFKIIIE-     91
                     .:...|.|.|:.:||..|...|::.:||:|.| |.|::..| 
BL03600___yrd     51 LIEWKNVEKSRIYLGDQAEAYLQLFREAEETL-DGFQLKTEG     91


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