Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05319 and BL03597
See
DNA alignment /
Visit
BSNT_05319 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:25
# Commandline: needle
# -asequence pep-align/BSNT_05319___yvpA.1.5803.seq
# -bsequence pep-align/BL03597___yvpA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05319___yvpA-BL03597___yvpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05319___yvpA-BL03597___yvpA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05319___yvpA
# 2: BL03597___yvpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 162/222 (73.0%)
# Similarity: 181/222 (81.5%)
# Gaps: 2/222 ( 0.9%)
# Score: 823.0
#
#
#=======================================
BSNT_05319___ 1 MKKIVSILFMFG-LVMGFSQFQPSTVFAADKVVHETIIVPKNTTYDGKGQ 49
||::...:.:.| ||.||.|..|....||: |||:||:|.|..||||||:
BL03597___yvp 1 MKRLAGTVILSGLLVCGFGQALPEKALAAE-VVHKTIVVEKGQTYDGKGK 49
BSNT_05319___ 50 RFVAGKELGDGSQSENQDPVFRVEDGATLKNVVLGAPAADGVHTYGNVNI 99
|.:||.|||||||.|:|.|:|:|||||||||||||||||||||||||.:|
BL03597___yvp 50 RLIAGPELGDGSQREDQKPIFKVEDGATLKNVVLGAPAADGVHTYGNASI 99
BSNT_05319___ 100 QNVKWEDVGEDALTVKKEGKVTIDGGSAQKASDKIFQINKASTFTVKNFT 149
.||.||||||||||||.||.|||:||||:.|:||||||||||||||||||
BL03597___yvp 100 NNVVWEDVGEDALTVKSEGSVTINGGSARLAADKIFQINKASTFTVKNFT 149
BSNT_05319___ 150 ADNGGKFIRQLGGSTFHVDVIIDKCTITNMKEAIFRTDSKTSTVRMTNTR 199
||.|||||||||||||...|.||.|||||||||||||||.||:|.|||||
BL03597___yvp 150 ADQGGKFIRQLGGSTFKAVVNIDNCTITNMKEAIFRTDSSTSSVTMTNTR 199
BSNT_05319___ 200 YSNVGQKWIGVQHIYENNNTQF 221
||.||||||||:|..|.||.:|
BL03597___yvp 200 YSKVGQKWIGVKHATERNNHEF 221
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.