Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01398 and BL03595
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence pep-align/BSNT_01398.1.5803.seq
# -bsequence pep-align/BL03595___yfiU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01398-BL03595___yfiU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01398-BL03595___yfiU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01398
# 2: BL03595___yfiU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 527
# Identity: 227/527 (43.1%)
# Similarity: 256/527 (48.6%)
# Gaps: 222/527 (42.1%)
# Score: 1151.0
#
#
#=======================================
BSNT_01398 1 MSEALTEQKGQKWAISLFTIGVFMAALDNGIISAALTTINESFAVSPSWG 50
..||||:.||||||||||||||||||||||||:||.||||||
BL03595___yfi 1 --------MNQKWAVLLFTIGVFMAALDNGIISAALTTINDSFQVSPSWG 42
BSNT_01398 51 SWGITLYTLGLSVSVPIVGKLSDRYGRKKLFLIEVCLFGLGSLLVALSQS 100
:||||||||||:|||||||||||||||||||:|||.|||.|||||||||:
BL03595___yfi 43 AWGITLYTLGLAVSVPIVGKLSDRYGRKKLFIIEVLLFGAGSLLVALSQN 92
BSNT_01398 101 FPLFLISRLIQALGGGGIFIIGSSHILATLPKEKQGKALGLLGAMNGMAA 150
||:||::||||:|||||||||||||||..|||||||.||||||||||:||
BL03595___yfi 93 FPMFLLARLIQSLGGGGIFIIGSSHILTALPKEKQGTALGLLGAMNGIAA 142
BSNT_01398 151 VLGPNIGSFLLDWTGSWHWLFLINLPIAVLLVVFGSYFIAETKAPEAKRL 200
|||||||||:||.|||||||||||||||..|::.....:.|||....|.|
BL03595___yfi 143 VLGPNIGSFILDMTGSWHWLFLINLPIAAALIILSVPLMKETKGGTRKPL 192
BSNT_01398 201 DAAGIFLLSLSILAVMYGMTNLDGVNLLHSLGNPEVYGCIIFGILCFAAL 250
|.||..:|||:|||||||:||::|..|...|.:|:||..::.|...||.|
BL03595___yfi 193 DLAGTVILSLAILAVMYGITNINGQRLSAVLSDPKVYFFLLIGCALFAGL 242
BSNT_01398 251 ISYEKRVEMRGGDPILAYSLLRNHMFQRTLIIGLLSGGLLAAVIFIPSYV 300
|.||||||::|||||||||||:|.:||.||.||.|||||||||||||:|.
BL03595___yfi 243 IFYEKRVELKGGDPILAYSLLKNKVFQWTLFIGFLSGGLLAAVIFIPAYA 292
BSNT_01398 301 EQYLGVPAAKAGY------------------------------------- 313
||||.|...||||
BL03595___yfi 293 EQYLHVAPEKAGYWMTPLALASGIGAGLGGMLADRKGPVKAARLSGVISF 342
BSNT_01398 313 -------------------------------------------------- 313
BL03595___yfi 343 AGFLLLSSWVTEKWEFVLASIIAGVGFGFLLGAPLNMLVSEAAKQDYGTA 392
BSNT_01398 313 -------------------------------------------------- 313
BL03595___yfi 393 LGTLSLVRQMGMTLAPALYAGYITAGYENIGTHIKHKLNDAGITLKGFAG 442
BSNT_01398 313 -------------------------------------------------- 313
BL03595___yfi 443 GETDVSRLSESLSQISDPKVKDIISEAIHESVGAGFFNLYFTAAVLSLAV 492
BSNT_01398 313 --------------------------- 313
BL03595___yfi 493 IASVSVLSLYRKKQTDTASRLKKDVTN 519
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