Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01398 and BL03595
See
Amino acid alignment /
Visit
BSNT_01398 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence dna-align/BSNT_01398.1.5803.seq
# -bsequence dna-align/BL03595___yfiU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01398-BL03595___yfiU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01398-BL03595___yfiU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01398
# 2: BL03595___yfiU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1646
# Identity: 655/1646 (39.8%)
# Similarity: 655/1646 (39.8%)
# Gaps: 790/1646 (48.0%)
# Score: 2123.5
#
#
#=======================================
BSNT_01398 1 ATGTCTGAAGCATTAACAGAGCAGAAAGGCCAAAAGTGGGC--GATCAGC 48
.|||| |||||||||||| .||.|
BL03595___yfi 1 ----GTGAA--------------------CCAAAAGTGGGCTGTATTA-- 24
BSNT_01398 49 CTGTTTACGATTGGTGTATTTATGGCTGCGCTAGATAACGGAATTATTTC 98
.||||||||||.||.||.|||||||||||..||||.|||||.||.|||||
BL03595___yfi 25 TTGTTTACGATCGGCGTGTTTATGGCTGCTTTAGACAACGGCATCATTTC 74
BSNT_01398 99 AGCTGCCTTAACAACGATAAACGAGTCGTTTGCCGTTTCTCCTTCCTGGG 148
|||.||..|.||.||.||.||.||.||.|||...||.||.||.||.||||
BL03595___yfi 75 AGCGGCACTGACGACAATCAATGATTCTTTTCAAGTATCCCCCTCATGGG 124
BSNT_01398 149 GATCATGGGGCATTACCCTTTATACGCTCGGTCTTAGC-GTCAGTGTGCC 197
||.||||||||||.||.||||||||||||||| ||.|| |||||.||.||
BL03595___yfi 125 GAGCATGGGGCATCACGCTTTATACGCTCGGT-TTGGCAGTCAGCGTTCC 173
BSNT_01398 198 AATCGTCGGAAAGCTTTCCGACCGCTACGGCAGAAAAAAACTCTTTCTCA 247
.||||||||||||||.||.|||||.||.||..|.|||||.||.|||.|||
BL03595___yfi 174 GATCGTCGGAAAGCTGTCTGACCGGTATGGACGCAAAAAGCTGTTTATCA 223
BSNT_01398 248 TTGAGGT-TTGCCTGTTCGGACTTGGTTCTTTGCTTGTTGCTTTGAGCCA 296
|.||.|| ||| |||||.||....|||||..||||.|||||.||||||||
BL03595___yfi 224 TCGAAGTCTTG-CTGTTTGGCGCCGGTTCGCTGCTCGTTGCATTGAGCCA 272
BSNT_01398 297 AAGCTTCCCGCTCTTTCTGATATCGCGGCTGATTCAGGCGCTTGGAGGCG 346
||.|||||||.|.||..||.|..||.||||||||||..|||||||.||.|
BL03595___yfi 273 AAACTTCCCGATGTTCTTGTTGGCGAGGCTGATTCAATCGCTTGGCGGAG 322
BSNT_01398 347 GCGGGATTTTCATCATCGGCAGCTCTCACATTCTCGCGACCCTTCCAAAG 396
||||.||.||.||.|||||.|||||.||.||||||.|..|.||.||.||.
BL03595___yfi 323 GCGGAATCTTTATTATCGGGAGCTCGCATATTCTCACTGCGCTGCCTAAA 372
BSNT_01398 397 GAAAAACAGGGGAAGGCACTTGGGCTGCTT---GGCGCAATGAACGGGAT 443
|||||||||||.|..|| |||||| |||| ||.||.||||||||.||
BL03595___yfi 373 GAAAAACAGGGAACCGC-CTTGGG--GCTTTTAGGTGCGATGAACGGAAT 419
BSNT_01398 444 GGCCGCTGTGCTCGGGCCAAATATCGGAAGCTTTCTGCTTGATTGGACCG 493
.||.||.||||||||.||.||||||||.||||||.|..|.|||..|||||
BL03595___yfi 420 CGCGGCAGTGCTCGGTCCGAATATCGGCAGCTTTATTTTGGATATGACCG 469
BSNT_01398 494 GGTCTTGGCATTGGCTATTTTTGATTAATTTGCCGATTGCCGTGCTATTG 543
|....|||||.|||||.||||||||.||..|.||||||||||
BL03595___yfi 470 GAAGCTGGCACTGGCTGTTTTTGATCAACCTTCCGATTGCCG-------- 511
BSNT_01398 544 GTTGTTTTCGGC-----TCATAC-----------TTTATCGCGGAAACAA 577
|.|| ||||.| ||.||...|||.||||
BL03595___yfi 512 --------CAGCACTGATCATCCTCAGCGTTCCATTGATGAAGGAGACAA 553
BSNT_01398 578 AAG------CACCTGAAGCTAAGCGCCTCGATGCGGCCGGAATCT-TCCT 620
||| ||| || ||.|.|||.|||..|||||||| || |..|
BL03595___yfi 554 AAGGCGGAACAC--GA----AAACCCCTAGATCTGGCCGGAA-CTGTGAT 596
BSNT_01398 621 TCTGTCCCTGTCGATTTTAGCCGTGATGTACGGCATGACGAACCTTGACG 670
..||||.||..||||||||||.|||||||||||.||.|||||..|..|||
BL03595___yfi 597 ATTGTCTCTTGCGATTTTAGCTGTGATGTACGGAATAACGAATATAAACG 646
BSNT_01398 671 GGGTAAATCTCTTACACAG--------------CTTGGGGAATCCGGAGG 706
| |||| ||||....||||..|||
BL03595___yfi 647 G--------------ACAGCGCCTGTCTGCCGTCTTGTCCGATCCAAAGG 682
BSNT_01398 707 TTTATGGATGTATTATTT-------TTGGCAT--ACTCTGTTTTGCAGCG 747
|||| .||.||| |.||| | .|.||| |||||.|..
BL03595___yfi 683 TTTA-------CTTTTTTCTCCTGATCGGC-TGCGCGCTG-TTTGCGGGA 723
BSNT_01398 748 CTTATCTCGTATGAAAAG-----AGAGTTGAAATGCGAGGAGGCGATCCC 792
||.||.|..||.|||||| ||||.|||| .||||||||.||.
BL03595___yfi 724 CTCATTTTTTACGAAAAGCGCGTAGAGCTGAA-----GGGAGGCGACCCG 768
BSNT_01398 793 ATTTTGGCGTA----TTCTCTGCTGCGAAACCATATGTTTCAGCGCACGC 838
||..|.||.|| ||.| |...||||.|..|||||||..|.||||
BL03595___yfi 769 ATCCTTGCCTACAGTTTAT----TAAAAAACAAGGTGTTTCAATGGACGC 814
BSNT_01398 839 TTATCATCGGTTTGTTATCCGGGGGGCTCTTGGCGGCAGTCATTTTTATC 888
||.|.|||||.||.||||||||.||.||||||||.||.||.||||||||.
BL03595___yfi 815 TTTTTATCGGATTTTTATCCGGCGGACTCTTGGCAGCCGTTATTTTTATT 864
BSNT_01398 889 CCGTCATATGTCGAGCAGTATTTGGGTGTCCCTGCCGCAAAAGCAGGCTA 938
||..||||||..||.||.||||||...|||.||.|.|.||||||.||.||
BL03595___yfi 865 CCTGCATATGCGGAACAATATTTGCACGTCGCTCCTGAAAAAGCGGGGTA 914
BSNT_01398 939 TTGA---------------------------------------------- 942
|||.
BL03595___yfi 915 TTGGATGACGCCTCTTGCGCTGGCTTCAGGGATAGGAGCCGGGCTCGGCG 964
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 965 GAATGCTCGCCGATCGAAAAGGACCGGTAAAGGCGGCCCGGCTCTCTGGC 1014
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1015 GTCATTTCGTTCGCCGGGTTTTTGCTCTTGTCCTCCTGGGTGACAGAGAA 1064
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1065 GTGGGAATTTGTTTTGGCAAGCATCATCGCAGGGGTCGGTTTTGGCTTTC 1114
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1115 TGTTAGGCGCGCCGTTAAATATGCTTGTATCCGAGGCGGCAAAACAGGAT 1164
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1165 TACGGGACAGCGCTCGGTACATTATCGCTCGTCAGGCAGATGGGGATGAC 1214
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1215 CTTGGCGCCCGCGCTGTATGCAGGATATATAACGGCCGGCTACGAAAATA 1264
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1265 TCGGCACACATATCAAACATAAGCTGAATGATGCAGGGATCACTCTGAAG 1314
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1315 GGGTTTGCAGGCGGTGAGACGGACGTATCAAGGCTGAGCGAATCCCTCAG 1364
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1365 CCAAATTTCCGACCCAAAAGTAAAAGACATCATAAGCGAAGCGATCCATG 1414
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1415 AAAGTGTGGGAGCGGGGTTTTTTAACCTCTACTTCACAGCCGCCGTCCTT 1464
BSNT_01398 942 -------------------------------------------------- 942
BL03595___yfi 1465 TCACTTGCAGTCATTGCTTCTGTCAGCGTTTTATCGCTTTATAGGAAAAA 1514
BSNT_01398 942 ---------------------------------------------- 942
BL03595___yfi 1515 ACAAACCGACACGGCAAGCCGTCTAAAAAAAGACGTGACAAACTAA 1560
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.