Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05397 and BL03592
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence pep-align/BSNT_05397___yvhJ.1.5803.seq
# -bsequence pep-align/BL03592___yvhJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05397___yvhJ-BL03592___yvhJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05397___yvhJ-BL03592___yvhJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05397___yvhJ
# 2: BL03592___yvhJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 359
# Identity: 216/359 (60.2%)
# Similarity: 268/359 (74.7%)
# Gaps: 30/359 ( 8.4%)
# Score: 1158.0
#
#
#=======================================
BSNT_05397___ 1 MPERVKVRVKKKKNKRKIILKRILLLFFLFSIVFAGIIGYKVYKTLQAAD 50
|.||:||:|:|||||::.::||.::|..|..:...|:..||:..|:.|||
BL03592___yvh 1 MAERIKVKVRKKKNKKRRLIKRFIVLMLLALLAVGGVGIYKIINTISAAD 50
BSNT_05397___ 51 SSYKELDRGEKSKLRKEVVDLKKKQPFSVLLLGVEDYATGGKGGRTDSII 100
.:|.||:||||||||.:|||::|| |||:|.:|||||:|.|:.|||||:|
BL03592___yvh 51 GTYDELERGEKSKLRDDVVDIQKK-PFSILFMGVEDYSTNGEHGRTDSLI 99
BSNT_05397___ 101 VATINPKQKTMKLLSIPRDTRVEISGDTSGTKTRINSAYGKGGAQTTVET 150
|.|::||:|:||:|||||||||.::.||:||||:||:||.|||...|:||
BL03592___yvh 100 VVTLDPKKKSMKMLSIPRDTRVHLASDTTGTKTKINAAYAKGGKDETIET 149
BSNT_05397___ 151 VEKLLNIPIDYYATVDFKGFKKTIDEVGGVDVEVPFDFNEKSDTSKSKKF 200
||..|.|||||||||||.|||..|||:||:||:|||||:||||.||||:.
BL03592___yvh 150 VEDFLGIPIDYYATVDFDGFKDVIDEIGGIDVDVPFDFSEKSDVSKSKRI 199
BSNT_05397___ 201 YFQKGNMHLNGEEALAYARMRKQDPRGDFGRNDRQKQILMAMLDQVSKPS 250
||:|||||||||||||||||||||.||||||||||||||.|.|||:|||.
BL03592___yvh 200 YFKKGNMHLNGEEALAYARMRKQDKRGDFGRNDRQKQILKAALDQISKPQ 249
BSNT_05397___ 251 NLAKIDTLADQVSDNITTNLRITQVLALQQIFSGFKGNDVETLTLKGSDL 300
|||||||:|.:.|.||.||.||||.||||||:|||.|:|::||.:.|.||
BL03592___yvh 250 NLAKIDTIAQKASKNIQTNFRITQALALQQIYSGFAGDDIKTLNITGQDL 299
BSNT_05397___ 301 YIGNKYFFQPDDEELTKVQEELYNFLYPDK-------------------- 330
.|.|.|:|:||.:.|..||.||.:.||||.
BL03592___yvh 300 TIANVYYFEPDQQNLENVQNELTHHLYPDSAADSSGTSSESSATADGADS 349
BSNT_05397___ 330 --------- 330
BL03592___yvh 350 SAESSAASY 358
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