Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02362 and BL03588

See DNA alignment / Visit BSNT_02362 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_02362___ykuN.1.5803.seq
#    -bsequence pep-align/BL03588___ykuN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02362___ykuN-BL03588___ykuN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02362___ykuN-BL03588___ykuN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02362___ykuN
# 2: BL03588___ykuN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:     106/159 (66.7%)
# Similarity:   123/159 (77.4%)
# Gaps:           1/159 ( 0.6%)
# Score: 574.0
# 
#
#=======================================

BSNT_02362___      1 MAKALITYASMSGNTEDIAFIIKDTLQEYELDIDCVEIDDMDASCLTSYD     50
                     |:||||.||||||||||||.||||||:||..|:...|:||:|...|..||
BL03588___yku      1 MSKALIAYASMSGNTEDIAMIIKDTLREYGFDVTIQEMDDVDTDSLAEYD     50

BSNT_02362___     51 YVLIGTYTWGDGDLPYEAEDFFEEVKQIQLNGLKTACFGSGDYSYPKFCE    100
                     .:|||||||||||||||||.|:|||..:.|.|.|.||||||||:||:|||
BL03588___yku     51 LLLIGTYTWGDGDLPYEAESFYEEVSSLDLKGKKAACFGSGDYAYPRFCE    100

BSNT_02362___    101 AVNLFNVMLQEAGAAVYQETLKIELAPETDEDVESCRAFARGFLAWADYM    150
                     |||.|..||:..||.:||||||||||||||||.|.|:.||.||:.||:..
BL03588___yku    101 AVNTFYTMLERTGADLYQETLKIELAPETDEDAECCKEFAEGFIRWAEQQ    150

BSNT_02362___    151 NKE-KIHVS    158
                     .:. :||||
BL03588___yku    151 KRRAEIHVS    159


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