Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02360 and BL03586

See DNA alignment / Visit BSNT_02360 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_02360___ykuL.1.5803.seq
#    -bsequence pep-align/BL03586___ykuL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02360___ykuL-BL03586___ykuL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02360___ykuL-BL03586___ykuL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02360___ykuL
# 2: BL03586___ykuL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:     128/147 (87.1%)
# Similarity:   140/147 (95.2%)
# Gaps:           0/147 ( 0.0%)
# Score: 657.0
# 
#
#=======================================

BSNT_02360___      1 MISLQSDQLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPV     50
                     |||||||:|||.|||||||:||||||||||||||||||||||||||||||
BL03586___yku      1 MISLQSDELLETTVGQFMIDADKVAHVQVGNNLEHALLVLTKTGYTAIPV     50

BSNT_02360___     51 LDPSYRLHGLIRTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHIN    100
                     ||.|:||||||.|||||:.|||||||||||||:|.||||||||||||.|:
BL03586___yku     51 LDASFRLHGLIGTNMIMDKIFGLERIEFEKLDKIHVEEVMLTDIPRLKID    100

BSNT_02360___    101 DPIMKGFGMVINNGFVCVENDEQVFEGIFTRRVVLKELNKHIRSLNK    147
                     |||:||||:||||.||||||:|||||||||||||||:||||:|:|||
BL03586___yku    101 DPILKGFGLVINNAFVCVENEEQVFEGIFTRRVVLKQLNKHLRTLNK    147


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.