Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02360 and BL03586
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence dna-align/BSNT_02360___ykuL.1.5803.seq
# -bsequence dna-align/BL03586___ykuL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02360___ykuL-BL03586___ykuL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02360___ykuL-BL03586___ykuL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02360___ykuL
# 2: BL03586___ykuL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 344/446 (77.1%)
# Similarity: 344/446 (77.1%)
# Gaps: 4/446 ( 0.9%)
# Score: 1288.0
#
#
#=======================================
BSNT_02360___ 1 ATGATAAGCTTACAATCAGATCAACTTCTTGAGGCAACAGTCGGACAATT 50
|||||.||.||.|||||||||.||||||||||..|.|||||.||.||.||
BL03586___yku 1 ATGATTAGTTTGCAATCAGATGAACTTCTTGAAACGACAGTAGGTCAGTT 50
BSNT_02360___ 51 TATGATTGAGGCGGACAAAGTAGCGCACGTGCAAGTCGGAAATAACCTTG 100
||||||.||.||.||.||||||||.||.||.|||||||||||.||.||.|
BL03586___yku 51 TATGATCGATGCTGATAAAGTAGCCCATGTTCAAGTCGGAAACAATCTGG 100
BSNT_02360___ 101 AGCACGCATTATTAGTATTGACAAAAACCGGATACACTGCCATCCCGGTT 150
|.||.||..|..|.||.|||||.|||||||||||.||.||.|||||.||.
BL03586___yku 101 AACATGCCCTTCTCGTTTTGACGAAAACCGGATATACCGCGATCCCTGTA 150
BSNT_02360___ 151 CTGGATCCTTCCTACCGTTTACATGGCTTAATCAGGACAAATATGATCAT 200
||.|||.||||.|.||||||.||.||.||||||.|.||.|||||||||||
BL03586___yku 151 CTTGATGCTTCTTTCCGTTTGCACGGATTAATCGGAACGAATATGATCAT 200
BSNT_02360___ 201 GAACAGTATTTTTGGACTT-GAGCGAATTGAGTTTGAAAAGCTTGACCA- 248
|.|.|..||.||.|| ||| ||.|||||.||.|||||.||||||||..|
BL03586___yku 201 GGATAAAATCTTCGG-CTTGGAACGAATCGAATTTGAGAAGCTTGATAAG 249
BSNT_02360___ 249 AATCACTGTTGAGGAAGTCATGCTGACCGACATTCCGCGCCTTCATATCA 298
|.||| ||||||.||||||||||||||.|||||.||.|||.|..|.||..
BL03586___yku 250 ATTCA-TGTTGAAGAAGTCATGCTGACGGACATCCCCCGCTTAAAAATTG 298
BSNT_02360___ 299 ATGATCCGATTATGAAGGGATTCGGCATGGTCATTAATAACGGATTTGTC 348
|||||||||||.|.||.||||||||..|.|||||.||.||||..|||||.
BL03586___yku 299 ATGATCCGATTTTAAAAGGATTCGGACTCGTCATCAACAACGCGTTTGTA 348
BSNT_02360___ 349 TGTGTTGAAAATGACGAGCAGGTATTTGAAGGGATTTTTACGAGAAGAGT 398
|||||.||||||||.||||||||.||.|||||.||||||||.||..|.||
BL03586___yku 349 TGTGTCGAAAATGAAGAGCAGGTTTTCGAAGGCATTTTTACAAGGCGTGT 398
BSNT_02360___ 399 CGTTTTAAAGGAATTGAATAAGCATATACGCTCGTTGAATAAGTAG 444
|||.|||||..|..|||||||||||.|..|..||||||||||.|||
BL03586___yku 399 CGTATTAAAACAGCTGAATAAGCATTTGAGGACGTTGAATAAATAG 444
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