Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02358 and BL03584

See DNA alignment / Visit BSNT_02358 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_02358___ykuK.1.5803.seq
#    -bsequence pep-align/BL03584___ykuK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02358___ykuK-BL03584___ykuK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02358___ykuK-BL03584___ykuK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02358___ykuK
# 2: BL03584___ykuK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     134/172 (77.9%)
# Similarity:   156/172 (90.7%)
# Gaps:           0/172 ( 0.0%)
# Score: 704.0
# 
#
#=======================================

BSNT_02358___      1 MADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTDSQVYRDY     50
                     ||||||||||||.||||.:|:.|||:|:::|||:||:||:|||||::::.
BL03584___yku      1 MADSFLFYNLSEDQMTFPEVIGRLKSFIRQDPRASYLLSVGTDSQIHQNC     50

BSNT_02358___     51 TKFITALHLHRTGKGAWGCLKNHTVDRPIHSLREKISLETAYSQETAAHI    100
                     ||||||:||||.||||||||||..|:|||||||||||||||||||.||::
BL03584___yku     51 TKFITAIHLHRKGKGAWGCLKNTVVNRPIHSLREKISLETAYSQEIAAYL    100

BSNT_02358___    101 LDGHLMDITDLLLPFTGEGADLTFEVHLDIGKKGLTKDLIQEMTGRITSM    150
                     |:.:..:|.|||||||.||||||.||||||||||:|||||||||||||||
BL03584___yku    101 LNDYFNEIMDLLLPFTDEGADLTLEVHLDIGKKGMTKDLIQEMTGRITSM    150

BSNT_02358___    151 GIEAKIKPDSYTAFSYANRFTK    172
                     ||.||||||||||.|||||:||
BL03584___yku    151 GICAKIKPDSYTASSYANRYTK    172


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