Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02357 and BL03583

See DNA alignment / Visit BSNT_02357 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_02357___ykuJ.1.5803.seq
#    -bsequence pep-align/BL03583___ykuJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02357___ykuJ-BL03583___ykuJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02357___ykuJ-BL03583___ykuJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02357___ykuJ
# 2: BL03583___ykuJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 80
# Identity:      71/80 (88.8%)
# Similarity:    75/80 (93.8%)
# Gaps:           1/80 ( 1.2%)
# Score: 366.0
# 
#
#=======================================

BSNT_02357___      1 MSQLMGIITRLQSLQETAEAANEPMQRYFEVNGEKICSVKYFEKNQTFEL     50
                     |||||||||||||||||||||.||.||.||||||||||||||||||||||
BL03583___yku      1 MSQLMGIITRLQSLQETAEAAGEPTQRNFEVNGEKICSVKYFEKNQTFEL     50

BSNT_02357___     51 TVFQKGEKPNTYPFDNIDMVSIEIFELLQ-     79
                     ||:|||:||.|:|||||||:||||||||| 
BL03583___yku     51 TVYQKGDKPTTFPFDNIDMISIEIFELLQQ     80


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