Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02326 and BL03563

See DNA alignment / Visit BSNT_02326 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence pep-align/BSNT_02326___ykvZ.1.5803.seq
#    -bsequence pep-align/BL03563___ykvZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02326___ykvZ-BL03563___ykvZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02326___ykvZ-BL03563___ykvZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02326___ykvZ
# 2: BL03563___ykvZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity:     214/323 (66.3%)
# Similarity:   267/323 (82.7%)
# Gaps:           2/323 ( 0.6%)
# Score: 1139.5
# 
#
#=======================================

BSNT_02326___      1 MANIKDIAEKAGVSVTTVSRVINNHPYVSEDKRKRVFEAMESLEYTRNIH     50
                     ||||::|||.||||:||||||:|.||||.|:||::|.|.:|.|||.||:|
BL03563___ykv      1 MANIREIAEAAGVSITTVSRVLNGHPYVKEEKRQKVLETIERLEYARNMH     50

BSNT_02326___     51 AVHLSKGFSNMIGVVLPTVNLPYFAELIAGIADAAAESGVHLSLFQTNYE    100
                     ||||||||||||||||||::||||.||:.|||:.||:.|||.||:||||:
BL03563___ykv     51 AVHLSKGFSNMIGVVLPTISLPYFGELLEGIAEEAAKEGVHFSLYQTNYQ    100

BSNT_02326___    101 VQKEIFALSQLKQRQVDGLIFCSKALADEKLMEWE--GPILLCQNSDNAR    148
                     ::||||||.||||||||||||||||::||.|::|.  ||.:|||:|....
BL03563___ykv    101 LEKEIFALEQLKQRQVDGLIFCSKAMSDEALLDWRETGPFILCQDSGEQH    150

BSNT_02326___    149 FPTISIPHQEAFRNGLDYLIAKGHKKIAICLARKKGMNSHFRIKAYKEAL    198
                     |.|:||||:||||.|||:||.|||.||||.||||.|||||||:|||||||
BL03563___ykv    151 FATVSIPHKEAFRLGLDFLIEKGHTKIAIGLARKNGMNSHFRLKAYKEAL    200

BSNT_02326___    199 EEIGEAFREDWVIEKAITINDGKALFHKWKTWKEKPTAIFVANDQVSAGL    248
                     ..|||.:||:||.|:::||.||:.||.:||..:|||||:||||||||||:
BL03563___ykv    201 AAIGEPYREEWVFERSLTITDGQKLFSEWKGMEEKPTAVFVANDQVSAGI    250

BSNT_02326___    249 FLEAKNQRVSVPDELAILSVDNHEISQALGITTIDIQTREMGKQAFAILE    298
                     ||||:..:|.:|..|||||.||..||:.|||:||:|..:||||:||.:|:
BL03563___ykv    251 FLEAQRHQVDIPGSLAILSCDNQPISEVLGISTIEINIKEMGKRAFRLLQ    300

BSNT_02326___    299 KRIQGQPIERKVLDYRLIERSTV    321
                     |||.|...|:..:.|:||:|:||
BL03563___ykv    301 KRIGGAGPEKLTVPYKLIKRATV    323


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