Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02326 and BL03563
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence dna-align/BSNT_02326___ykvZ.1.5803.seq
# -bsequence dna-align/BL03563___ykvZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02326___ykvZ-BL03563___ykvZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02326___ykvZ-BL03563___ykvZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02326___ykvZ
# 2: BL03563___ykvZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1020
# Identity: 686/1020 (67.3%)
# Similarity: 686/1020 (67.3%)
# Gaps: 102/1020 (10.0%)
# Score: 2147.0
#
#
#=======================================
BSNT_02326___ 1 ATGGCTAATATTAAAGACATTGCAGAAAAAGCCGGTGTCTCTGTTACAAC 50
|||||.|||||.|..||.||.||.|||...||.||.||.||..|.||.||
BL03563___ykv 1 ATGGCAAATATCAGGGAAATAGCTGAAGCGGCAGGGGTTTCCATCACGAC 50
BSNT_02326___ 51 GGTTTCCCGAGTCATAAACAATCATCCATACGTCAGTGAAGACAAACGAA 100
.|||||..|.||..|.|||...||.||.||.||||..|||||.||.||..
BL03563___ykv 51 TGTTTCGAGGGTTCTCAACGGCCACCCGTATGTCAAAGAAGAAAAGCGTC 100
BSNT_02326___ 101 AAAGAGTGTTTGAGGCAATGGAA----TCATTGGAGTACACGAGAAATAT 146
|||.|||..|||||.|.||.||| || ||.||..|.||.|||||
BL03563___ykv 101 AAAAAGTTCTTGAGACGATTGAACGCCTC----GAATATGCAAGGAATAT 146
BSNT_02326___ 147 TCACGCTGTACATTTGTCGAAAGGATTTTCAAACATGATTGGTGTTGTCT 196
.||.||.||.|||||.||.|||||.|||||.||||||||.||.|||||..
BL03563___ykv 147 GCATGCCGTTCATTTATCCAAAGGCTTTTCCAACATGATAGGCGTTGTGC 196
BSNT_02326___ 197 TGCCAACGGTTAATCTGCCATATTTTGCAGAGCTGATTGCAGGAATAGCC 246
||||.||..|.|..||.||.|||||.|..||||||.|.|.||||||.||.
BL03563___ykv 197 TGCCGACCATCAGCCTTCCTTATTTCGGCGAGCTGCTGGAAGGAATCGCT 246
BSNT_02326___ 247 GATGCAGCCGC---GGAATCCGGGGTTCAC--CTCTCTTTATTCCAAACA 291
||.|.|||.|| |||| ||.|||||| .||.||||| |||||||
BL03563___ykv 247 GAAGAAGCTGCGAAGGAA---GGCGTTCACTTTTCGCTTTA--CCAAACA 291
BSNT_02326___ 292 AACTATGAGGTACAAAAAGAAATCTTTGCGCTGTCCCAATTAAAGCAGC- 340
||.|||.|..|..||||||||||.||||| |||..||||||
BL03563___ykv 292 AATTATCAATTGGAAAAAGAAATTTTTGC---------ATTGGAGCAGCT 332
BSNT_02326___ 341 --------GCCAGGTTGACGGCCTGATTTTTTGCTCAAAGGCGCTTGCTG 382
|.|||||.||||||||||||||.||.|||||.|||.|..|.|
BL03563___ykv 333 GAAACAAAGACAGGTGGACGGCCTGATTTTCTGTTCAAAAGCGATGTCCG 382
BSNT_02326___ 383 ATGAGAAACTCATGGAATGG---GA---GGGCCCGATTTTGCTTTGCCAG 426
||||....||..||||.||| || .||||||.|..|.||.||||||
BL03563___ykv 383 ATGAAGCGCTTTTGGACTGGCGTGAAACCGGCCCGTTCATCCTGTGCCAG 432
BSNT_02326___ 427 AATTCAGATAATGC-----CCGCTTCCCAACCATCAGTATTCCTCACCAA 471
.|.|||| || .|.|||..||||..||||.|||||.||..||
BL03563___ykv 433 GACTCAG-----GCGAGCAGCACTTTGCAACGGTCAGCATTCCGCATAAA 477
BSNT_02326___ 472 GAAGCATTTCGGAAC--GGCTTGGACTATTTAATTGCCAAAGGGCACAAA 519
||||||||..| || ||.|||||.|.||||||||..||||||||||.|
BL03563___ykv 478 GAAGCATTCAG--ACTTGGATTGGATTTTTTAATTGAAAAAGGGCACACA 525
BSNT_02326___ 520 AAAATAGCCATCTGTTTGGCAAGAAAAAAAGGCATGAACAGTCATTTTCG 569
|||||.||.||..||||||||||.|||||.|||||||||||.||||||||
BL03563___ykv 526 AAAATCGCGATTGGTTTGGCAAGGAAAAACGGCATGAACAGCCATTTTCG 575
BSNT_02326___ 570 AATCAAAGCCTACAAAGAGGCATTGGAAGAGATCGGCGAGGCATTTCGTG 619
..||||.||.|||||.||.||.||||..|.||||||.|||.|.|..||.|
BL03563___ykv 576 CCTCAAGGCATACAAGGAAGCTTTGGCCGCGATCGGGGAGCCTTACCGGG 625
BSNT_02326___ 620 AAGACTGGGTAATTGAGAAAGCGATTACAATCAATGATGGG--AAGGCGC 667
||||.||||||.|||||....||.|.|||||.|..||.||| ||..|..
BL03563___ykv 626 AAGAGTGGGTATTTGAGCGGTCGCTGACAATTACCGACGGGCAAAAACTG 675
BSNT_02326___ 668 TTTTTCATAAATGGAAAACG-TGGAAGGAAAAGCCGACGGCTATTTTTGT 716
||.|.| .||||||||..| ||| ||||.||||||||||||.|||||||
BL03563___ykv 676 TTCTCC--GAATGGAAAGGGATGG-AGGAGAAGCCGACGGCTGTTTTTGT 722
BSNT_02326___ 717 TGCCAATGACCAAGTCTCAGCAGGGCTTTTTCTTGAAGCAAAGAACCAGC 766
.||.||.||||||||.|||||.||..||||||||||||| .||||
BL03563___ykv 723 CGCAAACGACCAAGTATCAGCCGGTATTTTTCTTGAAGC------GCAGC 766
BSNT_02326___ 767 GG------GTG--TCAGTACCGGATGAG-CTTGCAATCTTAAGCGTTGAT 807
|| ||| | |.|.||||| || ||.||.||.||||||..|||.
BL03563___ykv 767 GGCATCAAGTGGAT-ATTCCCGGA--AGCCTCGCTATTTTAAGCTGTGAC 813
BSNT_02326___ 808 AACCA--CGAAATCAGCCAAGCGCTTGGAATCACAACGATCGATATTCAG 855
||||| || ||||||.|||.|||.||.||..||||.||.||.||..|.
BL03563___ykv 814 AACCAGCCG--ATCAGCGAAGTGCTCGGCATTTCAACAATTGAAATCAAT 861
BSNT_02326___ 856 ACAAGGGAAATGGGAAAGCAGGCATTT-GCCATACTGGAAAAAAGAATTC 904
|.||.|||||||||.||||..||.||| ||| |.|||.||||||||||..
BL03563___ykv 862 ATAAAGGAAATGGGGAAGCGCGCGTTTCGCC-TTCTGCAAAAAAGAATCG 910
BSNT_02326___ 905 AAGGACAGCCGATTGAAAGGAAA--------GTTCTGGATTACCGTCTCA 946
..|| .|||| |...||||| |||| .||||...||.|
BL03563___ykv 911 GCGG--CGCCG---GGCCGGAAAAACTGACTGTTC---CTTACAAGCTGA 952
BSNT_02326___ 947 TCGAAAGATCGACTGTTTAG 966
||.||||..|||||||.||.
BL03563___ykv 953 TCAAAAGGGCGACTGTGTAA 972
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