Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02316 and BL03559

See DNA alignment / Visit BSNT_02316 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_02316___ykvV.1.5803.seq
#    -bsequence pep-align/BL03559___stoA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02316___ykvV-BL03559___stoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02316___ykvV-BL03559___stoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02316___ykvV
# 2: BL03559___stoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity:      96/170 (56.5%)
# Similarity:   127/170 (74.7%)
# Gaps:          12/170 ( 7.1%)
# Score: 503.5
# 
#
#=======================================

BSNT_02316___      1 MLTKRLLTIYIMLL----GLIAWFPCAAQAEEKQPAVPAVFLMKTIEGED     46
                       .:|:..||.::|    ||..:.|   ||..|| |.|||..|.|:||:.
BL03559___sto      1 --MRRISLIYPLILLFFTGLFVFQP---QASAKQ-ASPAVMQMNTVEGQR     44

BSNT_02316___     47 ISIPNKGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN     96
                     :.||.:|||||:||||:|||||::|||:|||:|::..| .||||||||:|
BL03559___sto     45 VVIPAEGQKTIVHFWTTWCPPCREELPRFQSYYESKQS-GVKLVTVNLLN     93

BSNT_02316___     97 SEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEI    146
                     :|:|:|.|:.||||||||||||.|.|||:||.|.::||||:|..|||||:
BL03559___sto     94 AEKNEQKVKQFIKANKLTFPIVFDKKGEMMKAYKVMTIPTTFFFNEKGEL    143

BSNT_02316___    147 EKTKIGPMTAEQLKEWTEE-    165
                     |||.:||:|.||:|||..: 
BL03559___sto    144 EKTFVGPITVEQMKEWAGKS    163


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.