Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02304 and BL03545

See DNA alignment / Visit BSNT_02304 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_02304___ykvI.1.5803.seq
#    -bsequence pep-align/BL03545___ykvI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02304___ykvI-BL03545___ykvI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02304___ykvI-BL03545___ykvI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02304___ykvI
# 2: BL03545___ykvI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity:     240/349 (68.8%)
# Similarity:   284/349 (81.4%)
# Gaps:           7/349 ( 2.0%)
# Score: 1200.0
# 
#
#=======================================

BSNT_02304___      1 MEQSKGSASQLAFVYVGTVVGAGFATGREIVEFFLKFGWFGLFGILVSGG     50
                     |.||:|||.||||||||||||||||||||||||||:|||.||.|||:||.
BL03545___ykv      1 MSQSQGSAFQLAFVYVGTVVGAGFATGREIVEFFLRFGWPGLAGILISGL     50

BSNT_02304___     51 MFTFLGAKLMIISKRINAKSYQEMNIFLFGAAAGRIINVFMLFVLLGVTS    100
                     ||||||||:|:|:.|||||||||:|.:|||...|:.:|||||.|||||||
BL03545___ykv     51 MFTFLGAKMMLIAVRINAKSYQELNKYLFGHTLGKFVNVFMLVVLLGVTS    100

BSNT_02304___    101 VMLSGAGALFEEQLGMSAQIGMLITIGLSLIVMTRGVKGIFGVNVFVVPL    150
                     ||||||||:||||||.|.|.||:.||.|||.||.:||||||||||.||||
BL03545___ykv    101 VMLSGAGAIFEEQLGFSNQAGMIATIALSLFVMMKGVKGIFGVNVIVVPL    150

BSNT_02304___    151 LILFSMIVVADSFIF--SESRNAAQWVWPHRWDWLLSAFSYGALNLSLAQ    198
                     |:||:::|:.|||||  .|..|.|  .:....||:|||.||||.||||||
BL03545___ykv    151 LLLFTVVVLFDSFIFRGPEIHNLA--AFSANPDWILSAVSYGAFNLSLAQ    198

BSNT_02304___    199 AVLVPLANEMSSEKVIKKGALIGGTMLTIVLSGSFLSLSTLPDVFLYDIP    248
                     |||||:|:|:.||::|.|||||||.:||:||..||||||||||..||::|
BL03545___ykv    199 AVLVPIASELKSERLIIKGALIGGVLLTLVLVASFLSLSTLPDALLYEVP    248

BSNT_02304___    249 MAQVVYLFARSVHLIYLLIIFGEVFTSVIGNLYGLEKQVQSFLPVKSKYI    298
                     |||||::...|||:|||.||||||||||||||||||||:..::.:||.|:
BL03545___ykv    249 MAQVVFIVQHSVHIIYLFIIFGEVFTSVIGNLYGLEKQINEYIHIKSLYV    298

BSNT_02304___    299 FAAIMITAYITSQIGYGRLISTIYPLFGYVSLAFIGALLCKKAPRRRSL    347
                     |..|::|.|:|.|||||:||||||||||.:||.||..|:.|:.|.|   
BL03545___ykv    299 FIFILLTIYLTGQIGYGKLISTIYPLFGQLSLVFIFFLIVKRVPER---    344


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