Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02292 and BL03543

See DNA alignment / Visit BSNT_02292 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_02292___spo0E.1.5803.seq
#    -bsequence pep-align/BL03543___spo0E.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02292___spo0E-BL03543___spo0E.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02292___spo0E-BL03543___spo0E.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02292___spo0E
# 2: BL03543___spo0E
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 88
# Identity:      37/88 (42.0%)
# Similarity:    50/88 (56.8%)
# Gaps:          11/88 (12.5%)
# Score: 138.0
# 
#
#=======================================

BSNT_02292___      1 MGGSSEQERLLVSIDEKRKLMIDAARKQGFTGHDTIRHSQELDCLINEYH     50
                     |....|:|.|||||.:||::|::||...|:||.:|||.|||||.||.||.
BL03543___spo      1 MQRYIEKEALLVSISKKRQMMVEAAEIYGYTGDETIRRSQELDQLIYEYQ     50

BSNT_02292___     51 QL-MQENEHSQGIQGLVKKLGLWPRRDVMPA--YDANK     85
                     :| |.||.....:|..:..:      |.:|.  |.|  
BL03543___spo     51 KLSMNENAPDNLLQDFLGCI------DCLPVEKYTA--     80


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