Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02275 and BL03535

See DNA alignment / Visit BSNT_02275 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:47
# Commandline: needle
#    -asequence pep-align/BSNT_02275___ykzE.1.5803.seq
#    -bsequence pep-align/BL03535.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02275___ykzE-BL03535.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02275___ykzE-BL03535.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02275___ykzE
# 2: BL03535
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 62
# Identity:      35/62 (56.5%)
# Similarity:    44/62 (71.0%)
# Gaps:           4/62 ( 6.5%)
# Score: 171.0
# 
#
#=======================================

BSNT_02275___      1 MKKNRHSRDMQNHKKPMNKKVLEEEFSSELGDYNAGKIIETLEVTKPEKK     50
                     |||::.|:||||||||||..||:||||:||||.||.|.|:.:|..|.:.|
BL03535            1 MKKHQKSKDMQNHKKPMNPDVLQEEFSNELGDVNAFKFIDVIENNKKKNK     50

BSNT_02275___     51 K---EKNKKQK-     58
                     |   :|..|.| 
BL03535           51 KADGQKRDKDKE     62


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