Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02275 and BL03535
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence dna-align/BSNT_02275___ykzE.1.5803.seq
# -bsequence dna-align/BL03535.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02275___ykzE-BL03535.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02275___ykzE-BL03535.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02275___ykzE
# 2: BL03535
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 117/205 (57.1%)
# Similarity: 117/205 (57.1%)
# Gaps: 44/205 (21.5%)
# Score: 336.5
#
#
#=======================================
BSNT_02275___ 1 GTGAAGAAAAACCGTCATAGCAGAGACATGCAAAATCATAAAAAGCCTAT 50
.||||.|||.|||...|.||||..||.||||||||.||||||||.||.||
BL03535 1 ATGAAAAAACACCAAAAAAGCAAGGATATGCAAAACCATAAAAAACCGAT 50
BSNT_02275___ 51 GAATAAAAAGGTGCTGGAGGAAGAGTTCTCAAGTGAACTTGGGGATTACA 100
||||....|.|||||..||||.||.||.||.|..|||||.||.|||..||
BL03535 51 GAATCCCGATGTGCTTCAGGAGGAATTTTCGAACGAACTGGGCGATGTCA 100
BSNT_02275___ 101 ATGCCGGGAAGATCATCGAAACGCTG-GAAGTCACCAAGCCTGAAAAGAA 149
|.|||...||..|.||||| || || || ||.||.||
BL03535 101 ACGCCTTTAAATTTATCGA-----TGTGA--TC---------GAGAACAA 134
BSNT_02275___ 150 AAAAGAAAAAAACAAAAA---------ACAAAA-----ATAA-------- 177
.|||.|.||.|||||||| |||.|| ||||
BL03535 135 TAAAAAGAAGAACAAAAAGGCGGACGGACAGAAGCGGGATAAAGATAAAG 184
BSNT_02275___ 177 ----- 177
BL03535 185 AATGA 189
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