Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02265 and BL03530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence pep-align/BSNT_02265___ykrI.1.5803.seq
# -bsequence pep-align/BL03530___ykrI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02265___ykrI-BL03530___ykrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02265___ykrI-BL03530___ykrI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02265___ykrI
# 2: BL03530___ykrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity: 184/388 (47.4%)
# Similarity: 250/388 (64.4%)
# Gaps: 32/388 ( 8.2%)
# Score: 865.5
#
#
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BSNT_02265___ 1 MRRGIIVEKNKKFVTLLTPDGQFLKAKNDRHSYEIGEEIMLPSETRMG-R 49
|||||||||||||||||||||||||||:....||||:||..|:||||. |
BL03530___ykr 1 MRRGIIVEKNKKFVTLLTPDGQFLKAKSTEEDYEIGQEIAFPAETRMSRR 50
BSNT_02265___ 50 RASFFDFFKLRPFKMGIFTMTAIMLFIFIVLPVFSNNKAYAYMTIDINPS 99
||.|||...|||.|.|:|::.||||..|:::|...|||||||||||||||
BL03530___ykr 51 RAGFFDLLSLRPLKAGVFSIAAIMLLAFMIIPDVLNNKAYAYMTIDINPS 100
BSNT_02265___ 100 VEMALNSDYEVIELTPLNDEGQKVVNDIDDWEKTDFKKVIDDIITDCSEH 149
.|:.||.:.|||:|.|||::|:.:::.|.:|||:|||:||.:|:.|..:.
BL03530___ykr 101 FELTLNKNCEVIDLVPLNEDGKALMDSIKNWEKSDFKEVISEIVEDSDKS 150
BSNT_02265___ 150 GYVKKSKEILISTVYENTEDNTYKKAVKKQLNDVTEKY-KTTYRMESLES 198
|||.:|||:||:|||||.||:|||..||.:::||.:|| :..|:||::||
BL03530___ykr 151 GYVTESKEVLIATVYENNEDDTYKATVKSEIDDVAKKYEQQNYKMEAVES 200
BSNT_02265___ 199 DMQTREKAKKEGVSTGSYIKSNEKNDNKDIKDDSSKPSGEEDQKSDENED 248
|:.||.||:|||:|||.||:| :||..:|.:|....|::|.|:|::
BL03530___ykr 201 DLDTRAKAQKEGISTGRYIRS-----HKDELEDKNKDDDNENKKDDQNQE 245
BSNT_02265___ 249 ENTDQTDTQDSKQGDNEQLND---ADSGDQKE-EKADDQIDDSDKDKKI- 293
|||.:.:....::...||..| ||:.|..: ||..|: |.|..|:::
BL03530___ykr 246 ENTGEKEKAVKEEDQPEQHTDDKEADTEDHPDGEKPSDE-DQSQPDQEME 294
BSNT_02265___ 294 KESDENTNTEKDGDHEQTPIQDPQDKGNENNGADKGQSQYHRDWNNGEQG 343
||.:.|:...| :|| |:|..||...|..........|
BL03530___ykr 295 KEKESNSPNTK----------NPQ----EHNHNDKDGQQTEEGTPKSGSG 330
BSNT_02265___ 344 KNRSSSRRDNASDRRNPNGYSSDNNSAQNEDSPSAPGE 381
.|:.||:.......:.| ||..:.| |..||.|||
BL03530___ykr 331 SNQESSKSPPYQKEKKP----SDQTNKQ-EYPPSGPGE 363
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