Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02265 and BL03530

See DNA alignment / Visit BSNT_02265 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:46
# Commandline: needle
#    -asequence pep-align/BSNT_02265___ykrI.1.5803.seq
#    -bsequence pep-align/BL03530___ykrI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02265___ykrI-BL03530___ykrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02265___ykrI-BL03530___ykrI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02265___ykrI
# 2: BL03530___ykrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity:     184/388 (47.4%)
# Similarity:   250/388 (64.4%)
# Gaps:          32/388 ( 8.2%)
# Score: 865.5
# 
#
#=======================================

BSNT_02265___      1 MRRGIIVEKNKKFVTLLTPDGQFLKAKNDRHSYEIGEEIMLPSETRMG-R     49
                     |||||||||||||||||||||||||||:....||||:||..|:||||. |
BL03530___ykr      1 MRRGIIVEKNKKFVTLLTPDGQFLKAKSTEEDYEIGQEIAFPAETRMSRR     50

BSNT_02265___     50 RASFFDFFKLRPFKMGIFTMTAIMLFIFIVLPVFSNNKAYAYMTIDINPS     99
                     ||.|||...|||.|.|:|::.||||..|:::|...|||||||||||||||
BL03530___ykr     51 RAGFFDLLSLRPLKAGVFSIAAIMLLAFMIIPDVLNNKAYAYMTIDINPS    100

BSNT_02265___    100 VEMALNSDYEVIELTPLNDEGQKVVNDIDDWEKTDFKKVIDDIITDCSEH    149
                     .|:.||.:.|||:|.|||::|:.:::.|.:|||:|||:||.:|:.|..:.
BL03530___ykr    101 FELTLNKNCEVIDLVPLNEDGKALMDSIKNWEKSDFKEVISEIVEDSDKS    150

BSNT_02265___    150 GYVKKSKEILISTVYENTEDNTYKKAVKKQLNDVTEKY-KTTYRMESLES    198
                     |||.:|||:||:|||||.||:|||..||.:::||.:|| :..|:||::||
BL03530___ykr    151 GYVTESKEVLIATVYENNEDDTYKATVKSEIDDVAKKYEQQNYKMEAVES    200

BSNT_02265___    199 DMQTREKAKKEGVSTGSYIKSNEKNDNKDIKDDSSKPSGEEDQKSDENED    248
                     |:.||.||:|||:|||.||:|     :||..:|.:|....|::|.|:|::
BL03530___ykr    201 DLDTRAKAQKEGISTGRYIRS-----HKDELEDKNKDDDNENKKDDQNQE    245

BSNT_02265___    249 ENTDQTDTQDSKQGDNEQLND---ADSGDQKE-EKADDQIDDSDKDKKI-    293
                     |||.:.:....::...||..|   ||:.|..: ||..|: |.|..|::: 
BL03530___ykr    246 ENTGEKEKAVKEEDQPEQHTDDKEADTEDHPDGEKPSDE-DQSQPDQEME    294

BSNT_02265___    294 KESDENTNTEKDGDHEQTPIQDPQDKGNENNGADKGQSQYHRDWNNGEQG    343
                     ||.:.|:...|          :||    |:|..||...|..........|
BL03530___ykr    295 KEKESNSPNTK----------NPQ----EHNHNDKDGQQTEEGTPKSGSG    330

BSNT_02265___    344 KNRSSSRRDNASDRRNPNGYSSDNNSAQNEDSPSAPGE    381
                     .|:.||:.......:.|    ||..:.| |..||.|||
BL03530___ykr    331 SNQESSKSPPYQKEKKP----SDQTNKQ-EYPPSGPGE    363


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