Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02842 and BL03514

See DNA alignment / Visit BSNT_02842 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:36
# Commandline: needle
#    -asequence pep-align/BSNT_02842.1.5803.seq
#    -bsequence pep-align/BL03514.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02842-BL03514.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02842-BL03514.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02842
# 2: BL03514
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:      96/283 (33.9%)
# Similarity:   139/283 (49.1%)
# Gaps:          11/283 ( 3.9%)
# Score: 395.0
# 
#
#=======================================

BSNT_02842         1 ---MINYDLIIDGKYLSETLPGVSLSSFRPEAPVFERQTAGTNALINGTM     47
                        .::||..:..:.|:..||.....||.||||..:|:|... ..|||.:
BL03514            1 MKLFLDYDNGLGEQSLNSLLPFFEPLSFTPEAPGIDRETVSI-PRINGVV     49

BSNT_02842        48 MLKRGNTGRYTERKINIKVLVE---ANSSYQFQIKRDAVYNLFVKEDPYY     94
                     :.:......||||||.::..:.   |.:.|||   |..:|.|.||..|||
BL03514           50 LPQHPRDVTYTERKITVEFYLNSIIAENFYQF---RRELYALLVKPFPYY     96

BSNT_02842        95 VINTQQPYKRWLVTCDDAFSIYQENGKKYQEVDITLTAIQGLAESLNDST    144
                     :.....|..|:.||||..|||.:|..|.:....:....|.|||||...|.
BL03514           97 ISTDLLPNLRFRVTCDGNFSIPKEKEKNFVTFTVEFNNITGLAESKFTSL    146

BSNT_02842       145 ASMELKDEKFHLGMNIRRDSTPVFHFQNKNSFVVDNIGDVKLDPINYNYN    194
                     .......|.:..||||:......:.|:|:..|.|.|.||..::|:.::||
BL03514          147 TKQNFDVEHWSPGMNIQMRDDLEYRFKNRKRFQVYNTGDAYINPLEHDYN    196

BSNT_02842       195 VEMYLQGTNISITNITTNETLTLNGKYSKTDKITLLKHHILKNSAPISDR    244
                     |.::..|.|::|.|.|..|.|.:..:..||.:::.:|.:.:.|..||. .
BL03514          197 VALWAAGKNVTIINHTNGEKLKIEQELKKTQRVSFIKQYTVINKTPIK-T    245

BSNT_02842       245 SGRFPTLAAGQNQFRIAGATYSNIRFITHFYYK    277
                     |||.|.|..|.|:|.|.......|.|.|.|||.
BL03514          246 SGRLPGLDIGMNKFEILNTNDFEIIFDTRFYYA    278


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