Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02824 and BL03500

See DNA alignment / Visit BSNT_02824 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence pep-align/BSNT_02824.1.5803.seq
#    -bsequence pep-align/BL03500.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02824-BL03500.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02824-BL03500.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02824
# 2: BL03500
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity:      45/178 (25.3%)
# Similarity:    79/178 (44.4%)
# Gaps:          24/178 (13.5%)
# Score: 149.5
# 
#
#=======================================

BSNT_02824         1 -----MARRKQLTETLKGQITNEEREERLQQEEKLKDFSPLQEKPPYWLS     45
                          .:...||.:....:...:|...|.:.|:|||..|. ..|||.||.
BL03500            1 MPRPAKSAALQLIQGNPNKKNTKELAARAKHEKKLKMRSE-NIKPPTWLD     49

BSNT_02824        46 TMAKNEWRRIYPHIINLPI-SELDSTLLAIYCNSYAQYREAMADIAKDGQ     94
                     .:||.|::||...:..:.| :|.|.::||.|||:|:||......|.:|| 
BL03500           50 KVAKKEFKRIAALLSEVEIMTEADISMLAAYCNAYSQYISITKIIEEDG-     98

BSNT_02824        95 VMFEKNSRGETVK------KKNPSVDIMNSMSKEIRGIAGQLGLSLDSRL    138
                     :|.....:||..|      :::|.:....:...:::..|...||:..:|.
BL03500           99 IMIHTEGQGENGKPVKLIGEEHPLLKRQKNFYDQMKSAANDFGLTPSARA    148

BSNT_02824       139 RIVGLDSDSEE-----DDEFGAMAIDDD    161
                     ::....:..|.     :.||..:     
BL03500          149 KLAITKTQEEREKTLAEKEFSNV-----    171


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