Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05093 and BL03481

See DNA alignment / Visit BSNT_05093 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:13
# Commandline: needle
#    -asequence pep-align/BSNT_05093___yvaK.1.5803.seq
#    -bsequence pep-align/BL03481___yvaK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05093___yvaK-BL03481___yvaK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05093___yvaK-BL03481___yvaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05093___yvaK
# 2: BL03481___yvaK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity:     216/248 (87.1%)
# Similarity:   233/248 (94.0%)
# Gaps:           2/248 ( 0.8%)
# Score: 1188.0
# 
#
#=======================================

BSNT_05093___      1 MKVVTPKPFTFKGGDKAVLLLHGFTGNTADVRMLGRYLNERGYTCHAPQY     50
                     ||:|.|:|||||||.|||||||||||||||||||||||||:|||||||||
BL03481___yva      1 MKIVKPQPFTFKGGKKAVLLLHGFTGNTADVRMLGRYLNEKGYTCHAPQY     50

BSNT_05093___     51 EGHGVPPEELVHTGPEDWWKNVMDGYEYLKSEGYESIAACGLSLGGVFSL    100
                     :|||||||||:.||||||||:||||||||||||||.||||||||||||||
BL03481___yva     51 KGHGVPPEELLSTGPEDWWKDVMDGYEYLKSEGYEQIAACGLSLGGVFSL    100

BSNT_05093___    101 KLGYTVPIKGIVPMCAPMHIKSEEVMYQGVLSYARNYKKFEGKSPEQIEE    150
                     ||||||||||||||||||:|||||.||:|||.|||||||||||:.|||..
BL03481___yva    101 KLGYTVPIKGIVPMCAPMYIKSEETMYEGVLDYARNYKKFEGKTAEQINA    150

BSNT_05093___    151 EMKEFEKTPMNTLKALQDLIADVRNNVDMIYSPTFVVQARHDHMINTESA    200
                     ||:||:||||||||||||||||||.:|||||||||||||||||||||:||
BL03481___yva    151 EMEEFKKTPMNTLKALQDLIADVREHVDMIYSPTFVVQARHDHMINTDSA    200

BSNT_05093___    201 NIIYNEVETDDKQLKWYEESGHVITLDKERDLVHQDVYEFLEKLDW--    246
                     ||||||||||||||||||||||.|||||||:.:|:|||:|||.|||  
BL03481___yva    201 NIIYNEVETDDKQLKWYEESGHAITLDKERETLHKDVYQFLETLDWQT    248


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