Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05093 and BL03481
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:13
# Commandline: needle
# -asequence dna-align/BSNT_05093___yvaK.1.5803.seq
# -bsequence dna-align/BL03481___yvaK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05093___yvaK-BL03481___yvaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05093___yvaK-BL03481___yvaK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05093___yvaK
# 2: BL03481___yvaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity: 586/753 (77.8%)
# Similarity: 586/753 (77.8%)
# Gaps: 18/753 ( 2.4%)
# Score: 2258.5
#
#
#=======================================
BSNT_05093___ 1 ATGAAAGTTGTGACACCAAAACCATTTACATTTAAAGGCGGAGACAAAGC 50
||||||.||||.|.||||.||||.||.|||||||||||||||.|.|||||
BL03481___yva 1 ATGAAAATTGTCAAACCACAACCTTTCACATTTAAAGGCGGAAAAAAAGC 50
BSNT_05093___ 51 GGTGCTTTTGCTGCATGGCTTTACAGGAAATACAGCGGATGTAAGGATGC 100
.||.||..|||||||.||.|||||.||.||.||.|||||.||.||.||||
BL03481___yva 51 CGTCCTGCTGCTGCACGGATTTACGGGCAACACGGCGGACGTTAGAATGC 100
BSNT_05093___ 101 TGGGACGATATTTGAATGAACGCGGCTATACGTGCCACGCGCCTCAATAT 150
|.|||.||||||||||||||...|||||.||.|||||.|||||.||||||
BL03481___yva 101 TCGGAAGATATTTGAATGAAAAAGGCTACACATGCCATGCGCCCCAATAT 150
BSNT_05093___ 151 GAAGGACATGGCGTCCCGCCTGAAGAACTTGT----ACATACGGGGCCCG 196
.||||.||.|||||.||.||.|||||||||.| ||| ||.||.|
BL03481___yva 151 AAAGGCCACGGCGTGCCTCCAGAAGAACTTCTCTCCACA----GGACCGG 196
BSNT_05093___ 197 AAGACTGGTGGAAAAACGTAATGGATGGCTATGAATACTTAAAATCTGAA 246
||||||||||||||.||||.|||||.||.||||||||..|.|||||.|||
BL03481___yva 197 AAGACTGGTGGAAAGACGTCATGGACGGATATGAATATCTGAAATCGGAA 246
BSNT_05093___ 247 GGCTATGAGAGCATTGCTGCCTGCGGACTGTCGCTTGGCGGGGTTTTTTC 296
||.|||||....||.||.||.|||||||||||.||.||.|||||||||||
BL03481___yva 247 GGATATGAACAAATCGCCGCTTGCGGACTGTCTCTCGGAGGGGTTTTTTC 296
BSNT_05093___ 297 GCTGAAATTGGGTTACACTGTACCCATAAAGGGAATTGTCCCAATGTGCG 346
..|||||||||||||||||||||||||||||||||||||.||||||||||
BL03481___yva 297 ATTGAAATTGGGTTACACTGTACCCATAAAGGGAATTGTTCCAATGTGCG 346
BSNT_05093___ 347 CACCGATGCATATTAAGAGTGAAGAGGTTATGTATCAAGGCGTTCTTTCA 396
|.||||||.|.||.||.||.||||||...|||||..|.||.||.|||...
BL03481___yva 347 CGCCGATGTACATCAAAAGCGAAGAGACGATGTACGAGGGTGTGCTTGAT 396
BSNT_05093___ 397 TACGCTCGCAATTACAAAAAGTTTGAGGGGAAAAGCCCGGAGCAAATTGA 446
||.||.||||||||.||.||.|||||.||.||.|...|||||||.|||.|
BL03481___yva 397 TATGCCCGCAATTATAAGAAATTTGAAGGCAAGACAGCGGAGCAGATTAA 446
BSNT_05093___ 447 AGAGGAAATGAAAGAATTCGAAAAAACGCCGATGAATACCCTCAAGGCAC 496
.|..||.|||.||||||||.||||||||||||||||.||..|.||.||||
BL03481___yva 447 CGCTGAGATGGAAGAATTCAAAAAAACGCCGATGAACACGTTGAAAGCAC 496
BSNT_05093___ 497 TGCAAGACTTAATTGCTGATGTGCGGA-ATAATGTCGATATGATTTATTC 545
||||.||.||.|||||.||||| |.|| |..||||.||.|||||.|||||
BL03481___yva 497 TGCAGGATTTGATTGCCGATGT-CAGAGAGCATGTGGACATGATCTATTC 545
BSNT_05093___ 546 ACCGACATTTGTGGTGCAGGCCCGTCATGACCACATGATTAATACCGAAA 595
.||.||||||||.||||||||.||.||.||.||.|||||||||||.||.|
BL03481___yva 546 GCCTACATTTGTCGTGCAGGCGCGCCACGATCATATGATTAATACGGATA 595
BSNT_05093___ 596 GCGCCAATATTATTTACAACGAAGTGGAAACTGATGATAAACAGCTGAAA 645
||||.||.||.||.|||||.|||||.|||||.||||||||.|||||||||
BL03481___yva 596 GCGCAAACATCATCTACAATGAAGTTGAAACGGATGATAAGCAGCTGAAA 645
BSNT_05093___ 646 TGGTACGAGGAATCAGGGCATGTCATTACACTCGACAAAGAACGTG-ACC 694
|||||.||.||||||||.||||.|||.|||.|.||.||||||||.| |.|
BL03481___yva 646 TGGTATGAAGAATCAGGTCATGCCATCACATTGGATAAAGAACGCGAAAC 695
BSNT_05093___ 695 TCGTCCATCAGGATGTGTATGAATTTTTAGAGAAGCTCGATTGG------ 738
.| |.||..|||||||||||.||||||||||.|.|.|.||||||
BL03481___yva 696 AC-TGCACAAGGATGTGTATCAATTTTTAGAAACGTTGGATTGGCAGACA 744
BSNT_05093___ 739 TAA 741
|||
BL03481___yva 745 TAA 747
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