Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05093 and BL03481

See Amino acid alignment / Visit BSNT_05093 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:13
# Commandline: needle
#    -asequence dna-align/BSNT_05093___yvaK.1.5803.seq
#    -bsequence dna-align/BL03481___yvaK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05093___yvaK-BL03481___yvaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05093___yvaK-BL03481___yvaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05093___yvaK
# 2: BL03481___yvaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity:     586/753 (77.8%)
# Similarity:   586/753 (77.8%)
# Gaps:          18/753 ( 2.4%)
# Score: 2258.5
# 
#
#=======================================

BSNT_05093___      1 ATGAAAGTTGTGACACCAAAACCATTTACATTTAAAGGCGGAGACAAAGC     50
                     ||||||.||||.|.||||.||||.||.|||||||||||||||.|.|||||
BL03481___yva      1 ATGAAAATTGTCAAACCACAACCTTTCACATTTAAAGGCGGAAAAAAAGC     50

BSNT_05093___     51 GGTGCTTTTGCTGCATGGCTTTACAGGAAATACAGCGGATGTAAGGATGC    100
                     .||.||..|||||||.||.|||||.||.||.||.|||||.||.||.||||
BL03481___yva     51 CGTCCTGCTGCTGCACGGATTTACGGGCAACACGGCGGACGTTAGAATGC    100

BSNT_05093___    101 TGGGACGATATTTGAATGAACGCGGCTATACGTGCCACGCGCCTCAATAT    150
                     |.|||.||||||||||||||...|||||.||.|||||.|||||.||||||
BL03481___yva    101 TCGGAAGATATTTGAATGAAAAAGGCTACACATGCCATGCGCCCCAATAT    150

BSNT_05093___    151 GAAGGACATGGCGTCCCGCCTGAAGAACTTGT----ACATACGGGGCCCG    196
                     .||||.||.|||||.||.||.|||||||||.|    |||    ||.||.|
BL03481___yva    151 AAAGGCCACGGCGTGCCTCCAGAAGAACTTCTCTCCACA----GGACCGG    196

BSNT_05093___    197 AAGACTGGTGGAAAAACGTAATGGATGGCTATGAATACTTAAAATCTGAA    246
                     ||||||||||||||.||||.|||||.||.||||||||..|.|||||.|||
BL03481___yva    197 AAGACTGGTGGAAAGACGTCATGGACGGATATGAATATCTGAAATCGGAA    246

BSNT_05093___    247 GGCTATGAGAGCATTGCTGCCTGCGGACTGTCGCTTGGCGGGGTTTTTTC    296
                     ||.|||||....||.||.||.|||||||||||.||.||.|||||||||||
BL03481___yva    247 GGATATGAACAAATCGCCGCTTGCGGACTGTCTCTCGGAGGGGTTTTTTC    296

BSNT_05093___    297 GCTGAAATTGGGTTACACTGTACCCATAAAGGGAATTGTCCCAATGTGCG    346
                     ..|||||||||||||||||||||||||||||||||||||.||||||||||
BL03481___yva    297 ATTGAAATTGGGTTACACTGTACCCATAAAGGGAATTGTTCCAATGTGCG    346

BSNT_05093___    347 CACCGATGCATATTAAGAGTGAAGAGGTTATGTATCAAGGCGTTCTTTCA    396
                     |.||||||.|.||.||.||.||||||...|||||..|.||.||.|||...
BL03481___yva    347 CGCCGATGTACATCAAAAGCGAAGAGACGATGTACGAGGGTGTGCTTGAT    396

BSNT_05093___    397 TACGCTCGCAATTACAAAAAGTTTGAGGGGAAAAGCCCGGAGCAAATTGA    446
                     ||.||.||||||||.||.||.|||||.||.||.|...|||||||.|||.|
BL03481___yva    397 TATGCCCGCAATTATAAGAAATTTGAAGGCAAGACAGCGGAGCAGATTAA    446

BSNT_05093___    447 AGAGGAAATGAAAGAATTCGAAAAAACGCCGATGAATACCCTCAAGGCAC    496
                     .|..||.|||.||||||||.||||||||||||||||.||..|.||.||||
BL03481___yva    447 CGCTGAGATGGAAGAATTCAAAAAAACGCCGATGAACACGTTGAAAGCAC    496

BSNT_05093___    497 TGCAAGACTTAATTGCTGATGTGCGGA-ATAATGTCGATATGATTTATTC    545
                     ||||.||.||.|||||.||||| |.|| |..||||.||.|||||.|||||
BL03481___yva    497 TGCAGGATTTGATTGCCGATGT-CAGAGAGCATGTGGACATGATCTATTC    545

BSNT_05093___    546 ACCGACATTTGTGGTGCAGGCCCGTCATGACCACATGATTAATACCGAAA    595
                     .||.||||||||.||||||||.||.||.||.||.|||||||||||.||.|
BL03481___yva    546 GCCTACATTTGTCGTGCAGGCGCGCCACGATCATATGATTAATACGGATA    595

BSNT_05093___    596 GCGCCAATATTATTTACAACGAAGTGGAAACTGATGATAAACAGCTGAAA    645
                     ||||.||.||.||.|||||.|||||.|||||.||||||||.|||||||||
BL03481___yva    596 GCGCAAACATCATCTACAATGAAGTTGAAACGGATGATAAGCAGCTGAAA    645

BSNT_05093___    646 TGGTACGAGGAATCAGGGCATGTCATTACACTCGACAAAGAACGTG-ACC    694
                     |||||.||.||||||||.||||.|||.|||.|.||.||||||||.| |.|
BL03481___yva    646 TGGTATGAAGAATCAGGTCATGCCATCACATTGGATAAAGAACGCGAAAC    695

BSNT_05093___    695 TCGTCCATCAGGATGTGTATGAATTTTTAGAGAAGCTCGATTGG------    738
                     .| |.||..|||||||||||.||||||||||.|.|.|.||||||      
BL03481___yva    696 AC-TGCACAAGGATGTGTATCAATTTTTAGAAACGTTGGATTGGCAGACA    744

BSNT_05093___    739 TAA    741
                     |||
BL03481___yva    745 TAA    747


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