Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05101 and BL03478

See DNA alignment / Visit BSNT_05101 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:13
# Commandline: needle
#    -asequence pep-align/BSNT_05101.1.5803.seq
#    -bsequence pep-align/BL03478___yvzC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05101-BL03478___yvzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05101-BL03478___yvzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05101
# 2: BL03478___yvzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      49/76 (64.5%)
# Similarity:    55/76 (72.4%)
# Gaps:          15/76 (19.7%)
# Score: 255.0
# 
#
#=======================================

BSNT_05101         1 ---------------MVNNDYSLNQLALEIGVSPATLSRVLNGERRPGQL     35
                                    |:.::.||||||:||||||||||||||||||||||
BL03478___yvz      1 MVKKIHIKRDFVLQYMIEHNLSLNQLAIEIGVSPATLSRVLNGERRPGQL     50

BSNT_05101        36 VIGKMLHYFNLKFEDLFYYDFIDKSQ     61
                     |||||:.|||.||||||||..:||||
BL03478___yvz     51 VIGKMIQYFNKKFEDLFYYKDVDKSQ     76


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