Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05101 and BL03478
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:13
# Commandline: needle
# -asequence dna-align/BSNT_05101.1.5803.seq
# -bsequence dna-align/BL03478___yvzC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05101-BL03478___yvzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05101-BL03478___yvzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05101
# 2: BL03478___yvzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 138/231 (59.7%)
# Similarity: 138/231 (59.7%)
# Gaps: 45/231 (19.5%)
# Score: 498.0
#
#
#=======================================
BSNT_05101 1 ---------------------------------------------ATGGT 5
|||.|
BL03478___yvz 1 ATGGTAAAAAAGATTCATATCAAAAGAGATTTTGTTCTCCAGTACATGAT 50
BSNT_05101 6 TAATAACGATTATTCCCTTAATCAGCTTGCGCTGGAAATCGGAGTCTCAC 55
|.|..||.||...|||.|.|||||||||||..|.||||||||.||.||.|
BL03478___yvz 51 TGAACACAATCTCTCCTTAAATCAGCTTGCCATTGAAATCGGCGTATCCC 100
BSNT_05101 56 CCGCCACACTGAGCCGCGTGCTGAATGGAGAAAGACGGCCGGGGCAGCTT 105
|.||.|||||.|||.|.||..|.|||||.|||||..||||.||.||.|||
BL03478___yvz 101 CGGCGACACTCAGCAGAGTTTTAAATGGCGAAAGGAGGCCCGGACAACTT 150
BSNT_05101 106 GTGATCGGTAAAATGCTTCACTATTTTAATTTGAAATTTGAGGATCTTTT 155
||||||||.||.|||.||||.|||||.||....||||||||.|||||.||
BL03478___yvz 151 GTGATCGGAAAGATGATTCAGTATTTCAACAAAAAATTTGAAGATCTCTT 200
BSNT_05101 156 TTACTATGATTTTATTGACAAAAGTCAATGA 186
|||.|||.|...|.|||||||||||||||.|
BL03478___yvz 201 TTATTATAAAGATGTTGACAAAAGTCAATAA 231
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