Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05135 and BL03463
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:15
# Commandline: needle
# -asequence pep-align/BSNT_05135___cggR.1.5803.seq
# -bsequence pep-align/BL03463___cggR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05135___cggR-BL03463___cggR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05135___cggR-BL03463___cggR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05135___cggR
# 2: BL03463___cggR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity: 260/346 (75.1%)
# Similarity: 296/346 (85.5%)
# Gaps: 31/346 ( 9.0%)
# Score: 1343.0
#
#
#=======================================
BSNT_05135___ 1 -------------------------MQYIRLTEPIGRRSLSASLGISERV 25
:||||||||||||||:||||||||:
BL03463___cgg 1 MNQLIQAQKKLLPDLLDVMQKRYKILQYIRLTEPIGRRSLAASLGISERI 50
BSNT_05135___ 26 LRGEVQFLKEQNLVDIKTNGMTLTEEGYELLSVLEDTMKDVLGLTLLEKT 75
||.||||||||||::|||.||.||.||.:||.|||||||||||||.||.|
BL03463___cgg 51 LRAEVQFLKEQNLLEIKTTGMILTPEGSDLLKVLEDTMKDVLGLTHLENT 100
BSNT_05135___ 76 LKERLNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRFSGKNIVAVTGG 125
|||||||.:.||||||||||||||||||||||||||.||:|:||||||||
BL03463___cgg 101 LKERLNLDEVIIVSGDSDQSPWVKKEMGRAAVACMKNRFTGENIVAVTGG 150
BSNT_05135___ 126 TTIEAVAEMMTPDSKNRELLFVPARGGLGEDVKNQANTICAHMAEKASGT 175
||:||||||||||||||:||||||||||||:|:|||||||||||||||||
BL03463___cgg 151 TTLEAVAEMMTPDSKNRKLLFVPARGGLGENVRNQANTICAHMAEKASGT 200
BSNT_05135___ 176 YRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHGIGEAKTMAQR 225
|:|||||||||:.||||||||||:||||.||:|:||::||||:|||||:|
BL03463___cgg 201 YKLLFVPGQLSKEAYSSIIEEPSIKEVLQTIQSSSMVIHGIGDAKTMAER 250
BSNT_05135___ 226 RNTTLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPD 275
|||..||||||::|:||.|||||||:..|||:|||||||:||:|:|:||:
BL03463___cgg 251 RNTPKEDLKKIEENEAVAEAFGYYFDRHGEVIHKVHSVGIQLEDLDSIPN 300
BSNT_05135___ 276 IIAVAGGSSKAEAIEAYFKKPRNTVLVTDEGAAKKLLRDE------ 315
|||||||||||:||||||||||||||:|||||||:|||:.
BL03463___cgg 301 IIAVAGGSSKADAIEAYFKKPRNTVLITDEGAAKQLLREASSLNIN 346
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