Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05139 and BL03462

See DNA alignment / Visit BSNT_05139 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:15
# Commandline: needle
#    -asequence pep-align/BSNT_05139___yvbT.1.5803.seq
#    -bsequence pep-align/BL03462___yvbT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05139___yvbT-BL03462___yvbT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05139___yvbT-BL03462___yvbT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05139___yvbT
# 2: BL03462___yvbT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity:     278/336 (82.7%)
# Similarity:   309/336 (92.0%)
# Gaps:           1/336 ( 0.3%)
# Score: 1471.0
# 
#
#=======================================

BSNT_05139___      1 MSNNQRKDTLLSVLNLSPVVQGGTIAESFRNSMDLARRAEEWGYHRYWLA     50
                     ||....|:|..|||||||:||||...:||:.|||||:.||:|||||:|||
BL03462___yvb      1 MSEQHFKNTKYSVLNLSPIVQGGNAEQSFKQSMDLAQHAEKWGYHRFWLA     50

BSNT_05139___     51 EHHNIEGVASSATAVLIGHIAGGTKKIRVGSGGIMLPNHSSLVIAEQFGT    100
                     |||||||||||||:||||:|||||||:|:|||||||||||.|||||||||
BL03462___yvb     51 EHHNIEGVASSATSVLIGYIAGGTKKMRIGSGGIMLPNHSPLVIAEQFGT    100

BSNT_05139___    101 LETLYPGRIDLGLGRAPGTDQLTARALRRNINSGEDFPEQLEELRNYFKP    150
                     ||:||||||||||||||||||||||||||||:|||||||||||||.||||
BL03462___yvb    101 LESLYPGRIDLGLGRAPGTDQLTARALRRNISSGEDFPEQLEELRQYFKP    150

BSNT_05139___    151 SGNVRNQVRAIPGEGIDVPIWLLGSSGFSARLAGELGLPFAFAAHFSPAN    200
                     ||||||.||||||||:||||||||||||||||||||||||||||||||||
BL03462___yvb    151 SGNVRNHVRAIPGEGLDVPIWLLGSSGFSARLAGELGLPFAFAAHFSPAN    200

BSNT_05139___    201 TVPALELYRNSFTPSDVLDEPYAMVGVTIIAADTNEKAQHLATSHYQRFL    250
                     |:|||||||:||.|. ||.|||||||||:|||||:.|||.|||||||:||
BL03462___yvb    201 TLPALELYRSSFKPG-VLKEPYAMVGVTVIAADTDAKAQRLATSHYQKFL    249

BSNT_05139___    251 DLVRGTPNQLKPPVEDMDQIWSPYEKAMVNEQLSSTIVGGPEEVKAKLED    300
                     |||||.|.||||||:||:|||:|.|||||||||||||:|||:.||.|||:
BL03462___yvb    250 DLVRGAPTQLKPPVDDMEQIWTPREKAMVNEQLSSTIIGGPDSVKEKLEE    299

BSNT_05139___    301 FVKTTQADEIMVNSETFEHADRMRSFEIIADVWNNR    336
                     |::||||:|||:|||||:||||:||||||||||.|.
BL03462___yvb    300 FIRTTQANEIMINSETFDHADRLRSFEIIADVWKNG    335


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