Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05139 and BL03462

See Amino acid alignment / Visit BSNT_05139 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:15
# Commandline: needle
#    -asequence dna-align/BSNT_05139___yvbT.1.5803.seq
#    -bsequence dna-align/BL03462___yvbT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05139___yvbT-BL03462___yvbT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05139___yvbT-BL03462___yvbT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05139___yvbT
# 2: BL03462___yvbT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1024
# Identity:     776/1024 (75.8%)
# Similarity:   776/1024 (75.8%)
# Gaps:          29/1024 ( 2.8%)
# Score: 2828.0
# 
#
#=======================================

BSNT_05139___      1 ATGTCTAACAAC--CAACGCAAAGATACCTTGCTTTCTGTCTTGAATTTA     48
                     |||||  |.|||  ||...||||.||||...|..|||.||.||.|||.|.
BL03462___yvb      1 ATGTC--AGAACAGCATTTCAAAAATACGAAGTATTCCGTATTAAATCTG     48

BSNT_05139___     49 TCTCCGGTTGTTCAGGGAGGAA---CGATTGCAGAATCATTCCGAAACA-     94
                     |||||..|.||.||.||.||||   ||   |.|.||||.||  .||||| 
BL03462___yvb     49 TCTCCTATCGTACAAGGCGGAAATGCG---GAACAATCTTT--TAAACAA     93

BSNT_05139___     95 -GCATGGACTTGGCGCGCCGGGCAGAGGAATGGGGCTATCACCGTTACTG    143
                      ..|||||.|||||||..|..||.||..|||||||.||.|||.|.|.|||
BL03462___yvb     94 TCTATGGATTTGGCGCAGCATGCCGAAAAATGGGGGTACCACAGGTTCTG    143

BSNT_05139___    144 GCTTGCTGAACATCATAATATAGAAGGTGTTGCAAGCTCTGCCACCGCAG    193
                     |||.|||||.||.||||||||.|||||||||||||||||.||||||.|.|
BL03462___yvb    144 GCTGGCTGAGCACCATAATATCGAAGGTGTTGCAAGCTCGGCCACCTCTG    193

BSNT_05139___    194 TTTTGATTGGCCATATTGCCGGAGGCACGAAGAAAATCCGCGTCGGTTCC    243
                     |||||||.|||.||||.||||||||.||.||||||||.|||.||||.||.
BL03462___yvb    194 TTTTGATCGGCTATATCGCCGGAGGTACTAAGAAAATGCGCATCGGCTCG    243

BSNT_05139___    244 GGCGGCATTATGCTCCCGAACCACTCTTCATTAGTCATTGCTGAACAATT    293
                     ||.||.||||||||.||||||||.||..|..|.|||||.||.|||||.||
BL03462___yvb    244 GGAGGGATTATGCTGCCGAACCATTCCCCGCTCGTCATCGCCGAACAGTT    293

BSNT_05139___    294 CGGCACACTGGAAACACTGTATCCCGGGCGGATTGATCTGGGGCTTGGAC    343
                     |||.||.||.|||.|.||.||||||||..|.||.|||.|.||.|||||||
BL03462___yvb    294 CGGAACGCTTGAATCCCTTTATCCCGGCAGAATCGATTTAGGACTTGGAC    343

BSNT_05139___    344 GTGCGCCGGGAACAGACCAATTGACAGCCAGAGCGC--TCCGAAGAAACA    391
                     |.||.|||||.||.||.|||||.|||||  |.||||  |..|||||||||
BL03462___yvb    344 GCGCTCCGGGCACTGATCAATTAACAGC--GCGCGCATTAAGAAGAAACA    391

BSNT_05139___    392 TCAACAGCGGTGAGGATTTTCCAGAACAATTAGAGGAACTGC-GCAATTA    440
                     |.|.||||||.|||||||||||.||.||..|.||.||||||| |||| ||
BL03462___yvb    392 TAAGCAGCGGGGAGGATTTTCCCGAGCAGCTTGAAGAACTGCGGCAA-TA    440

BSNT_05139___    441 TTTTAAACCGTCAGGAAATGTGCGCAATCAAGTTCGCGCCATTCCCGGAG    490
                     ||||||.|||||.||.|||||..|.|||||.||.||||||||.||.||||
BL03462___yvb    441 TTTTAAGCCGTCGGGCAATGTAAGAAATCATGTGCGCGCCATACCGGGAG    490

BSNT_05139___    491 -AGGGCATAGATGTGCCGATTTGGCTGCTGGGCTCAAGCGGCTTCAGCGC    539
                      ||||| |.|||||||||||||||||.||.||.||||||||.||||||||
BL03462___yvb    491 AAGGGC-TTGATGTGCCGATTTGGCTTCTCGGTTCAAGCGGATTCAGCGC    539

BSNT_05139___    540 CCGTCTGGCTGGCGAACTTGGTCTTCCGTTTGCGTTCGCGGCCCATTTCT    589
                     |||.||.||.||.||.||.|||.|.||||||||.||.|||||.|||||.|
BL03462___yvb    540 CCGGCTTGCCGGGGAGCTCGGTTTGCCGTTTGCATTTGCGGCTCATTTTT    589

BSNT_05139___    590 CACCGGCGAATACGGTTCCCGCTTTGGAGCTGTACCGCAATTCCTTCACG    639
                     |.||.||.||||||.|.||.||.|||||.|||||.||.|.|||.||.|.|
BL03462___yvb    590 CGCCCGCCAATACGCTGCCTGCCTTGGAACTGTATCGGAGTTCGTTTAAG    639

BSNT_05139___    640 CCGTCAGACGTGCTCG-ACGAACCGTATGCGATGGTCGGTGTCACCATTA    688
                     |   |.|.||| ||.| |.||.||.||||||||||||||.||.|||.|||
BL03462___yvb    640 C---CCGGCGT-CTTGAAGGAGCCTTATGCGATGGTCGGGGTTACCGTTA    685

BSNT_05139___    689 TCGCGGCAGATACAAACGAGAAAGCGCAGCACCTTGCGACTTCGCATTAT    738
                     ||||.||.|||||..|.|.|||||||||||.|||.||.||.|||||.|||
BL03462___yvb    686 TCGCAGCCGATACGGATGCGAAAGCGCAGCGCCTGGCAACGTCGCACTAT    735

BSNT_05139___    739 CAAAGGTTTCTTGATCTTGTCCGCGGTACGCCGAACCAGCTTAAACCGCC    788
                     ||.|.||||.|.||||||||||||||..|.||||..||||||||.|||||
BL03462___yvb    736 CAGAAGTTTTTGGATCTTGTCCGCGGCGCTCCGACACAGCTTAAGCCGCC    785

BSNT_05139___    789 TGTTGAGGATATGGACCAAATCTGGAGCCCGTATGAAAAAGCGATGGTCA    838
                     |||.||.||||||||.||.||.||||..|||...||||||||||||||.|
BL03462___yvb    786 TGTAGATGATATGGAACAGATTTGGACGCCGCGCGAAAAAGCGATGGTGA    835

BSNT_05139___    839 ATGAGCAGCTGAGCTCCACGATTGTCGGAGGTCCGGA-AGAAGTGAAGGC    887
                     |.||||||||.|||||.|||||..||||.||.||||| || .|||||.|.
BL03462___yvb    836 ACGAGCAGCTCAGCTCAACGATCATCGGCGGGCCGGACAG-TGTGAAAGA    884

BSNT_05139___    888 GAAGCTTGAAGATTTCGTCAAAACGACACAGGCTGACGAAATTATGGTTA    937
                     .|||||||||||.|||.||...|||||.|||||..||||.||.|||.|.|
BL03462___yvb    885 AAAGCTTGAAGAGTTCATCCGGACGACTCAGGCGAACGAGATCATGATCA    934

BSNT_05139___    938 ACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATC    987
                     |.||||||||.|||||.||.||.||||||.|.||.|||||.||||||||.
BL03462___yvb    935 ATTCAGAAACATTTGACCATGCTGACAGACTTCGCTCGTTCGAAATCATT    984

BSNT_05139___    988 GCTGACGTTTGGAACAACAGATAA   1011
                     ||.||.||.|||||.|||.|||||
BL03462___yvb    985 GCAGATGTATGGAAAAACGGATAA   1008


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05139 and BL03462

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
