Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05147 and BL03458

See DNA alignment / Visit BSNT_05147 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:15
# Commandline: needle
#    -asequence pep-align/BSNT_05147___yvbY.1.5803.seq
#    -bsequence pep-align/BL03458___yvbY.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05147___yvbY-BL03458___yvbY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05147___yvbY-BL03458___yvbY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05147___yvbY
# 2: BL03458___yvbY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     180/240 (75.0%)
# Similarity:   207/240 (86.2%)
# Gaps:           0/240 ( 0.0%)
# Score: 956.0
# 
#
#=======================================

BSNT_05147___      1 MTKGTIQNQESFLNRIASSLGRERRTGGVAVPEWAHQPQYKTLEGYSADD     50
                     ||.|||.|::.||||||..|||.||:.||.||::.||||::..:||:.|:
BL03458___yvb      1 MTNGTIHNKDGFLNRIAERLGRNRRSAGVTVPDYIHQPQHRVYQGYTQDE     50

BSNT_05147___     51 LVTVLKNHCVKIHTELIETDSTGLYDALREQVSRFSGGPVIIPKDPRFEE    100
                     ||.|||:||.||||||||||..||:|||.||.:||.||||:||||.||:|
BL03458___yvb     51 LVGVLKDHCRKIHTELIETDVIGLHDALYEQAARFGGGPVMIPKDDRFKE    100

BSNT_05147___    101 YGLKSLLTKDWPSEGTPVWEWDADKGEENIKKAEQANVGITFSEITLAES    150
                     |||..|||..||:|||.||||||..|:|||::|||||:|:||||||||||
BL03458___yvb    101 YGLSGLLTDKWPNEGTKVWEWDAAAGDENIQRAEQANIGVTFSEITLAES    150

BSNT_05147___    151 GTVVLFSSKDIGRSLSLLPTTYIAIVPKSSIVPRMTQASDIIRQNIADGV    200
                     ||||||||||.|||:||||||||||||||:|||||||||.||:|.||||.
BL03458___yvb    151 GTVVLFSSKDKGRSVSLLPTTYIAIVPKSTIVPRMTQASAIIKQKIADGD    200

BSNT_05147___    201 TVPSCINYITGPSNSADIEMDLVVGVHGPVKAAYILVSDR    240
                     .:||||||:||||||||||||||||||||||||||:|.||
BL03458___yvb    201 VIPSCINYVTGPSNSADIEMDLVVGVHGPVKAAYIVVEDR    240


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