Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05147 and BL03458
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:15
# Commandline: needle
# -asequence dna-align/BSNT_05147___yvbY.1.5803.seq
# -bsequence dna-align/BL03458___yvbY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05147___yvbY-BL03458___yvbY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05147___yvbY-BL03458___yvbY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05147___yvbY
# 2: BL03458___yvbY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 759
# Identity: 520/759 (68.5%)
# Similarity: 520/759 (68.5%)
# Gaps: 72/759 ( 9.5%)
# Score: 1687.0
#
#
#=======================================
BSNT_05147___ 1 ATGACGAAGGGAACCATTCAGAATCAAGAGAGCTTTTTAAACCGAATCGC 50
|||||.||.|||||.||.||.||..||||..|||||||||||||.||.||
BL03458___yvb 1 ATGACAAACGGAACAATCCACAACAAAGACGGCTTTTTAAACCGGATTGC 50
BSNT_05147___ 51 ATCCAGCCTGGGCCGTGAACGAAGAACAGG--------AGGCGTGGCAGT 92
....||.||.||||| .|||||| ||||||..|.||
BL03458___yvb 51 TGAAAGGCTCGGCCG--------CAACAGGCGTTCTGCAGGCGTCACCGT 92
BSNT_05147___ 93 CCCTGA----ATGGGCGCATCAGCCGCA-------ATATAAAACACTTGA 131
.||.|| || .||.|||||||| .|||| |.|
BL03458___yvb 93 TCCCGATTATAT----CCACCAGCCGCAGCACAGGGTATA-------TCA 131
BSNT_05147___ 132 AGGTTATTCAGCGGATGA-CTTAGTCACAGTGCTCAAA-AACCATTGTGT 179
|||.|||.||..|||||| ||| |||...|| ||.||| .||||.||...
BL03458___yvb 132 AGGCTATACACAGGATGAGCTT-GTCGGCGT-CTTAAAGGACCACTGCCG 179
BSNT_05147___ 180 CAAAATCCATACAGAGCTGATTGAAACGGAT-TCAACCGGCCTTTACGAT 228
.|||||.||.||.||||||||||||||.||| || |.||||.|..|.|||
BL03458___yvb 180 GAAAATTCACACGGAGCTGATTGAAACAGATGTC-ATCGGCTTGCATGAT 228
BSNT_05147___ 229 GCCCTGCGCGAGCAAGTCAGC-CGCTTTTCCGGAGGC---CCTGTCATCA 274
|||.||...||.|||| |||| ||.||| |||||| ||||||||.|
BL03458___yvb 229 GCCTTGTATGAACAAG-CAGCGCGATTT---GGAGGCGGGCCTGTCATGA 274
BSNT_05147___ 275 TTCCGAAGGACCCCCGCTTTGAAGAATACGGACTGAAAAGCCTGCTCACC 324
|.|||||.||...|||.|||.||||.|||||||||..|.|||||.|.||
BL03458___yvb 275 TCCCGAAAGATGACCGTTTTAAAGAGTACGGACTGTCAGGCCTGTTAAC- 323
BSNT_05147___ 325 AAGGAC---TGGCCGAGTGAAGGAACGCCGGTCTGGGAGTGGGATGCTGA 371
|||| |||||||.||||||.|||...||.|||||.|||||||
BL03458___yvb 324 --GGACAAGTGGCCGAATGAAGGGACGAAAGTGTGGGAATGGGATG---- 367
BSNT_05147___ 372 CAAAGGC----GAGGAAAATATCAAAAAAGCGGAGCAAGCCAATGTAGGG 417
||..||| ||.||.||.|||.|...|||.||.||.||.||..|.||.
BL03458___yvb 368 CAGCGGCCGGAGATGAGAACATCCAGCGAGCCGAACAGGCTAACATCGGC 417
BSNT_05147___ 418 ATTACATTCAGCGAAATAACATTGGCTGAGTCGGGGACGGTTGTCCTCTT 467
.|.|||||||||||.||.||..|.|||||.||.||.|||||.||||||||
BL03458___yvb 418 GTGACATTCAGCGAGATCACGCTTGCTGAATCCGGAACGGTCGTCCTCTT 467
BSNT_05147___ 468 CTCCTCAAAAGACATCGGCCGATCTCTCAGCCTTCTGCCGACGACTTATA 517
|..|||||||||||..||.||.||..|||||.|.|||||||||||.||||
BL03458___yvb 468 CAGCTCAAAAGACAAAGGACGTTCCGTCAGCTTGCTGCCGACGACATATA 517
BSNT_05147___ 518 TTGCGATCGTGCCGAAATCAAGCATTGTACCGAGAATGACACAAGCCAGT 567
|.||||||||.||||||...|.|||.||.|||.|.|||||||||||.||.
BL03458___yvb 518 TCGCGATCGTCCCGAAAAGCACCATCGTCCCGCGGATGACACAAGCAAGC 567
BSNT_05147___ 568 GATATCATCCGCCAAAACATTGCGGACGG---TGTCACTGTTCCTTCATG 614
|..||||||...|||||.|||||.||||| .|||| |.||.||.||
BL03458___yvb 568 GCAATCATCAAACAAAAGATTGCAGACGGCGACGTCA---TCCCGTCCTG 614
BSNT_05147___ 615 TATCAACTACATTACCGGACCGAGCAACTCAGCAGACATTGAAATGGATT 664
.||||||||..|.||.|||||||||||.|||||.||.||.||||||||..
BL03458___yvb 615 CATCAACTATGTCACTGGACCGAGCAATTCAGCCGATATCGAAATGGACC 664
BSNT_05147___ 665 TAGTTGTGGGAGTGCACGGACCTGTAAAGGCAGCATATATTCTCGTCTCT 714
|.||.||.||.||.|||||.||.||||||||.||||||||..||||....
BL03458___yvb 665 TTGTAGTCGGCGTCCACGGCCCCGTAAAGGCGGCATATATAGTCGTGGAG 714
BSNT_05147___ 715 GATCGCTGA 723
||.||.|.|
BL03458___yvb 715 GACCGGTAA 723
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