Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05170 and BL03454
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence pep-align/BSNT_05170___sigL.1.5803.seq
# -bsequence pep-align/BL03454___sigL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05170___sigL-BL03454___sigL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05170___sigL-BL03454___sigL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05170___sigL
# 2: BL03454___sigL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 232/437 (53.1%)
# Similarity: 324/437 (74.1%)
# Gaps: 1/437 ( 0.2%)
# Score: 1227.0
#
#
#=======================================
BSNT_05170___ 1 MMDMKLQQVQVLKPQLTQELRQAITLLGYHSAELAEYIDELSLENPLIER 50
|::.:||.|..|..|||.|.|||.:|.|.||||...|||||||||||||
BL03454___sig 1 -MNLHVQQQQTAKLHLTQGLAQAIHMLQYSSAELNSRIDELSLENPLIER 49
BSNT_05170___ 51 KETDTPPLSYHKTNKNRMNAQEAGLQLSNPQKTLQDALKQQSLDMNLTNT 100
|::|.|...|||||::..|...:..:.::.::.::.|||:|:||:.|::.
BL03454___sig 50 KDSDIPRSFYHKTNRHLQNEGISRSETAHSREDVKSALKRQALDLQLSSR 99
BSNT_05170___ 101 EKKIFNYLIHSLDSNGYLEEDVEEAARRLSVSAKETEAVLAKLQSLEPAG 150
||::|:||:.|||.|||:.||:...|..|:|:.:|.|.||.|||:|:|||
BL03454___sig 100 EKRVFSYLVESLDPNGYVTEDIAFIASELAVTREEAEEVLGKLQTLDPAG 149
BSNT_05170___ 151 IGARSLQECILLQLQRLPNRNEQAEMLVSAHFDAFAQKKWKALSVETGIP 200
|||||||||||:||:|||....:||.::|::||.||:|.||.||...|:.
BL03454___sig 150 IGARSLQECILIQLKRLPKETAKAEKVISSYFDLFAKKGWKELSERAGLS 199
BSNT_05170___ 201 LHTIQDISDDIAALHPRPGLLFARPEQDVYIEPDIFITVKNGHIAAELNT 250
|..:|||.|.:|.|.|||||::...:.:||:|||:.|:.::|.:..||::
BL03454___sig 200 LSELQDIQDLVAELSPRPGLIYGTDDGEVYVEPDLIISAEDGKLVLELSS 249
BSNT_05170___ 251 RSFPEIDLHPQYRTLLSSGSCQDTVSYLSAKYQEWRWLSRALRQRKQTIT 300
||||:|.|:..|...|...|..:..:|:|.|:::|:||..|||||::|:.
BL03454___sig 250 RSFPDIQLNAFYEPFLERQSKDEATAYISDKFKQWKWLDNALRQRRETMR 299
BSNT_05170___ 301 RIINELITRQKDFFLKGRSAMKPLTLREVADCLSLHESTVSRAIKGKTIQ 350
|::.|::.||||:||||:..:|||||:|:||.|.:||||||||:|||.:|
BL03454___sig 300 RVMAEIMVRQKDYFLKGKDELKPLTLKEIADALGVHESTVSRAVKGKIVQ 349
BSNT_05170___ 351 TPYGLFEMKLFFSAKAEASGDGDASNYAVKTHLENLINQEDKTKPLSDQK 400
||:.|.|:|.|||||.:.:.||.||::.||.||..||::|||.|||||||
BL03454___sig 350 TPFELCELKRFFSAKVKDAADGHASSHTVKAHLRRLIDEEDKMKPLSDQK 399
BSNT_05170___ 401 LVDLLYEQHGIQISRRTVAKYRDQMNIPSSAARKRYK 437
|.|||.|:||:.||||||||||||:||..|:.||||:
BL03454___sig 400 LADLLNEKHGVVISRRTVAKYRDQLNILPSSVRKRYQ 436
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