Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05179 and BL03448
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:18
# Commandline: needle
# -asequence pep-align/BSNT_05179.1.5803.seq
# -bsequence pep-align/BL03448.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05179-BL03448.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05179-BL03448.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05179
# 2: BL03448
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 515
# Identity: 295/515 (57.3%)
# Similarity: 392/515 (76.1%)
# Gaps: 33/515 ( 6.4%)
# Score: 1581.0
#
#
#=======================================
BSNT_05179 1 -------------------------MTPFIVKTLGVEAFGFVHLTQNVIN 25
:||:::||||||||||||||||:||
BL03448 1 MNKTFVLNLGANMASFLLSVLFSMWLTPYVIKTLGVEAFGFVHLTQNMIN 50
BSNT_05179 26 YFSVITVALSSVVVRFFSVAAHRGEREKANAYISNYLAASVLISLLLLLP 75
|||:||||||:||||||||:||||..::|..|::.|:.:|:::|::|..|
BL03448 51 YFSIITVALSAVVVRFFSVSAHRGALDEARGYMNTYIVSSLVLSVILFFP 100
BSNT_05179 76 LAGSAFFIDRVMNVPQALLADVRLSILIGSLLFILTFLMAGFGAAPFYAN 125
|.|:.||||:::.||..||.||::::|||||||:|||:|:||.|.||:||
BL03448 101 LGGTVFFIDQIIRVPAGLLGDVQVALLIGSLLFLLTFVMSGFAAGPFFAN 150
BSNT_05179 126 RLYITSSIQAVQMLIRVLSVLLLFACFAPKIWQIQLAALAGAVIASVLSF 175
::||||:|||:|||||||||||:||.||||||.||||||.....|.:||.
BL03448 151 KIYITSTIQAIQMLIRVLSVLLIFAWFAPKIWHIQLAALIATASACILSI 200
BSNT_05179 176 YFFKKLIPWFSFRMKDLSFRTSKELFQAGAWSSVNQIGVLLFLQIDLLTA 225
:|||:|||||:||::|:||...|:|.|||.||||:|:|:||||||||:.|
BL03448 201 FFFKRLIPWFTFRVRDMSFAKCKKLLQAGGWSSVSQVGILLFLQIDLMVA 250
BSNT_05179 226 NLMLGASASGKYAAIIQFPLLLRSLAGTVASLFAPIMTSYYSKGDMEGLM 275
|:|||.|.||.||||||||||||:|:||:|::|:|.:|.||||||.|||:
BL03448 251 NVMLGVSESGMYAAIIQFPLLLRTLSGTLAAVFSPTITLYYSKGDKEGLV 300
BSNT_05179 276 NYANKAVRLNGLLLALPAALLGGLAGPFLTIWLGPSFSTIAPLLFIHAGY 325
.|||:|||.||:|||||||||||||||||::||||||..:..||.|||||
BL03448 301 RYANQAVRFNGILLALPAALLGGLAGPFLSLWLGPSFEHLKWLLLIHAGY 350
BSNT_05179 326 LVVSLAFMPLFYIWTAFNQQKTPAIVTLLLGAVNVVLAVTLSGPAHLGLY 375
|||||:..|||||:||:|:.:|||:.|:..|.||::||:.|||||.||||
BL03448 351 LVVSLSPAPLFYIFTAYNKLRTPALTTVAFGVVNLLLAIVLSGPAGLGLY 400
BSNT_05179 376 GITLAGAISLILKNAIFTPLYVSRITGYKKHVFFKGIIGLLSAAVFAWAV 425
||.||||.:|.|||.:|||:|.|:|||.:|.||:|||.|.::.|.|..||
BL03448 401 GIALAGAAALTLKNVVFTPIYASKITGERKRVFYKGIYGPVAGASFTLAV 450
BSNT_05179 426 CKAIQFVVKIDSWPSLIATGVTVSFCYAVFAFMLVCTKEERQLVLKRFRK 475
|.|:|::..|.|..||..|.:..:..|.:||:.::.||.||::|..:.:.
BL03448 451 CYALQYLFSIVSLLSLFVTALAATLAYGLFAYFVMLTKAERRIVTTKLQA 500
BSNT_05179 476 TKGAVNL-------- 482
.:.:::.
BL03448 501 YRCSLSFPFQKGFFK 515
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